September 20, 2021 Dataset Open Access

de Almeida, Bernardo P

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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.5502060", 
  "author": [
    {
      "family": "de Almeida, Bernardo P"
    }
  ], 
  "issued": {
    "date-parts": [
      [
        2021, 
        9, 
        20
      ]
    ]
  }, 
  "abstract": "<p>This repository holds the&nbsp;trained DeepSTARR model&nbsp;and the data&nbsp;used to train and evaluate the model.</p>\n\n<p><strong>Files:</strong></p>\n\n<ul>\n\t<li><strong>&lt;set&gt;.fa</strong>\n\n\t<ul>\n\t\t<li>FASTA files with DNA sequences of genomic regions from train/val/test sets.</li>\n\t</ul>\n\t</li>\n\t<li><strong>&lt;set&gt;*.txt</strong>\n\t<ul>\n\t\t<li>Files with developmental and housekeeping activity of genomic regions from train/val/test sets.</li>\n\t</ul>\n\t</li>\n\t<li><strong>DeepSTARR.model.h5 </strong>and<strong>&nbsp;DeepSTARR.model.json</strong>\n\t<ul>\n\t\t<li>DeepSTARR Keras model</li>\n\t</ul>\n\t</li>\n</ul>", 
  "title": "DeepSTARR manuscript data", 
  "type": "dataset", 
  "id": "5502060"
}