Published March 24, 2020 | Version v3
Dataset Open

Gut microbiota of wild arboreal and ground-feeding tropical primates

  • 1. Fondazione Edmund Mach

Description

16S rRNA gene and ITS sequences from fecal samples of 12 groups of Udzungwa (Tanzania) red colobus Procolobus gordonorum (total number of samples: 89), and five groups of yellow baboon Papio cynocephalus (total number of samples: 69).

The dataset consists of the following files:

  • 16S_raw.tar: raw 16S rRNA gene sequences;
  • 16S_filtered.fasta.gz: merged, adapter trimmed and quality filtered 16S rRNA gene sequences;
  • 16S_ID.txt: 16S file ID to sample ID mapping;
  • ITS_raw.tar: raw ITS sequences;
  • ITS_filtered.fasta.gz: merged, adapter trimmed and quality filtered ITS sequences;
  • ITS_ID.txt: ITS file ID to sample ID mapping;
  • Metadata.tsv: sample metadata;
  • Accessions.tsv: ENA project and sample accessions;
  • Helminths.tsv: helminths abundances table.

 

Files

16S_ID.txt

Files (1.1 GB)

Name Size Download all
md5:9119c15ba0d0e56d8365a395583b826e
43.5 MB Download
md5:1b6eac1192928e2aa6e571992808ca2f
9.4 kB Preview Download
md5:03a874d6787e64aef8e4f355e3fa5f00
398.3 MB Download
md5:8778cdf8073201336da9457e4215a9ad
47.6 kB Download
md5:918d4d3db70c19e62ebd6001cbfcc39f
6.3 kB Download
md5:44a48fc4c423c7986e0fa90e4cc4e0eb
51.3 MB Download
md5:6184097526aa5838019ce991e5ba7fe9
8.5 kB Preview Download
md5:a3725034ba8fcc63a3729c403a184120
586.2 MB Download
md5:ef43665f71f90f1458c49fba50f085fd
33.6 kB Download

Additional details

Funding

WILDGUT – GUT biota indices: a new tool for WILD animal conservation 752399
European Commission