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Test dataset for ProteinID

Vaudel, Marc; Martens, Lennart; Sigloch, Florian Christoph


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  <dc:creator>Vaudel, Marc</dc:creator>
  <dc:creator>Martens, Lennart</dc:creator>
  <dc:creator>Sigloch, Florian Christoph</dc:creator>
  <dc:date>2017-04-15</dc:date>
  <dc:description>This dataset can be used as an input for peptide and protein ID workflows. It was originally published in Vaudel et al., 2014, Proteomics (https://www.ncbi.nlm.nih.gov/pubmed/24678044).

A detailed description of the "qExactive01819" sample can be found on PRIDE (https://www.ebi.ac.uk/pride/archive/projects/PXD000674).

The provided FASTA protein database is the uniprot human reference database with the Crap database added. The second database additionally contains the most common mycoplasma contaminants. A detailed description of the provided databases can be found here: https://galaxyproject.github.io/training-material//Proteomics/tutorials/database-handling</dc:description>
  <dc:identifier>https://zenodo.org/record/546301</dc:identifier>
  <dc:identifier>10.5281/zenodo.546301</dc:identifier>
  <dc:identifier>oai:zenodo.org:546301</dc:identifier>
  <dc:relation>doi:10.1002/pmic.201300488</dc:relation>
  <dc:relation>url:https://www.ebi.ac.uk/pride/archive/projects/PXD000674</dc:relation>
  <dc:relation>url:https://www.ebi.ac.uk/pride/archive/projects/PXD000674</dc:relation>
  <dc:relation>doi:10.5281/zenodo.796184</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:subject>proteomics</dc:subject>
  <dc:subject>test data</dc:subject>
  <dc:title>Test dataset for ProteinID</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
</oai_dc:dc>
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