Journal article Open Access

APIR: a universal FDR-control framework for boosting peptide identification power by aggregating multiple proteomics database search algorithms

Chen, Yiling; Woyshner, Kyla; Mcdermott, MeiLu; Wang, Leo; Li, Jingyi


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{
  "description": "<p>The data folder includes all the processed database search results&nbsp;as well as the combining results from ConsensusID and Scaffold on the complex proteomics standard dataset generated from <em>Pyrococcus furiosus</em>.</p>\n\n<p>The Rcode folder contains all the&nbsp;R code files for running APIR, analyzing results, and generate figures.</p>\n\n<p>&nbsp;</p>\n\n<p>&nbsp;</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "Department of Statistics, University of California, Los Angeles, CA 90095", 
      "@id": "https://orcid.org/0000-0001-7259-2787", 
      "@type": "Person", 
      "name": "Chen, Yiling"
    }, 
    {
      "affiliation": "Department of Immuno-Oncology, Beckman Research Institute, City of Hope National Medical Center, Duarte CA 91010", 
      "@type": "Person", 
      "name": "Woyshner, Kyla"
    }, 
    {
      "affiliation": "Department of Immuno-Oncology, Beckman Research Institute, City of Hope National Medical Center, Duarte CA 91010", 
      "@type": "Person", 
      "name": "Mcdermott, MeiLu"
    }, 
    {
      "affiliation": "Departments of Pediatrics and Immuno-Oncology, Beckman Research Institute, City of Hope National Medical Center, Duarte CA 91010", 
      "@type": "Person", 
      "name": "Wang, Leo"
    }, 
    {
      "affiliation": "Department of Statistics, University of California, Los Angeles, CA 90095", 
      "@id": "https://orcid.org/0000-0002-9288-5648", 
      "@type": "Person", 
      "name": "Li, Jingyi"
    }
  ], 
  "headline": "APIR: a universal FDR-control framework for boosting peptide identification power by aggregating multiple proteomics database search algorithms", 
  "image": "https://zenodo.org/static/img/logos/zenodo-gradient-round.svg", 
  "datePublished": "2021-09-08", 
  "url": "https://zenodo.org/record/5202768", 
  "version": "Version 1", 
  "@context": "https://schema.org/", 
  "identifier": "https://doi.org/10.5281/zenodo.5202768", 
  "@id": "https://doi.org/10.5281/zenodo.5202768", 
  "@type": "ScholarlyArticle", 
  "name": "APIR: a universal FDR-control framework for boosting peptide identification power by aggregating multiple proteomics database search algorithms"
}
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