Dataset Open Access

Pre-Processed Cancer Multi-Omic Data from TCGA and Synthetic Data

Zhandos Sembay

ABSTRACT 

It contains the data of four omic profiles (CNV, mRNA, miRNA, and protein) obtained for BRCA, LGG, and LUAD obtained from the TCGA project. 

In addition, we provide synthetic data for a mixture of isotropic distributions.

Instructions: 

Cancer data are identified by cancer type (LGG: low-grade glioma, BRCA: breast cancer, and LUAD: lung cancer). The data are scaled by using the minima and maxima of each column so that the values are between 0 and 1. In these files, the columns are the features and the rows correspond to the patients.

The summary data contains only the numerical values. The columns are the features and the rows are the observations.

Inspiration:

This dataset uploaded to U-BRITE for "AI against CANCER DATA SCIENCE HACKATHON"

https://cancer.ubrite.org/hackathon-2021/

Acknowledgements

Diego Salazar, June 20, 2021, "Pre-processed Cancer multi-omic data from TCGA and synthetic data", IEEE Dataport, doi: https://dx.doi.org/10.21227/pjb8-d090.

https://ieee-dataport.org/documents/pre-processed-cancer-multi-omic-data-tcga-and-synthetic-data

U-BRITE last update date: 07/21/2021

U-BRITE location: /data/project/ubrite/cancer-hackathon/org/ieee-dataport/pre-processed-cancer-multi-omic-data-tcga-and-synthetic-data
Files (35.8 MB)
Name Size
DastasetFiles.zip
md5:c1a73e54862a2657482af85e357e432f 		35.8 MB Download
123
14
views
downloads
All versions This version
Views 123123
Downloads 1414
Data volume 501.0 MB501.0 MB
Unique views 113113
Unique downloads 1414
More info on how stats are collected.
Indexed in
Publication date:
July 21, 2021
DOI:
10.5281/zenodo.5120970

Zenodo DOI Badge

DOI 

10.5281/zenodo.5120970

Markdown 

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5120970.svg)](https://doi.org/10.5281/zenodo.5120970)

reStructedText 

.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.5120970.svg
   :target: https://doi.org/10.5281/zenodo.5120970

HTML 

<a href="https://doi.org/10.5281/zenodo.5120970"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.5120970.svg" alt="DOI"></a>

Image URL 

https://zenodo.org/badge/DOI/10.5281/zenodo.5120970.svg

Target URL 

https://doi.org/10.5281/zenodo.5120970

Keyword(s):
cancer multi-omic
Communities:
License (for files):
Creative Commons Attribution 4.0 International

Versions

Version 1 10.5281/zenodo.5120970 Jul 21, 2021
Cite all versions? You can cite all versions by using the DOI 10.5281/zenodo.5120969. This DOI represents all versions, and will always resolve to the latest one. Read more.

Share

Cite as

Export