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Published July 19, 2021 | Version 2.0.0
Software Open

nf-core/bcellmagic: nf-core/bcellmagic version 2.0.0 "Lumos"

  • 1. @qbicsoftware
  • 2. Boehringer Ingelheim
  • 3. QBiC
  • 4. @SciLifeLab | Karolinska Institutet
  • 5. Science for Life Laboratory

Description

:warning: Major enhancements

  • The pipeline has been ported to Nextflow DSL2
  • Analysis of TCR repertoires is now also supported
  • Added Rmarkdown report with a summary of the repertoire analysis
  • Analysis of data with RACE 5' protocol is now supported
  • Scripts to download and build new versions of the IMGT database have been added
  • Improvement of UMI handling and possibility to exchange position of C and V-primers
  • Updated to new versions of Immcantation Framework, providing support for the AIRR format

Please check the CHANGELOG for more details.

Files

nf-core/bcellmagic-2.0.0.zip

Files (2.5 MB)

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Additional details

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