Journal article Open Access

Real-time Genomics for Tracking Severe Acute Respiratory Syndrome Coronavirus 2 Border Incursions after Virus Elimination, New Zealand

Douglas, Jordan; Geoghegan, Jemma; Hadfield, James; Bouckaert, Remco; Storey, Matthew; Ren, Xiaoyun; de Ligt, Joep; French, Nigel; Welch, David


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  <identifier identifierType="DOI">10.5281/zenodo.5093838</identifier>
  <creators>
    <creator>
      <creatorName>Douglas, Jordan</creatorName>
      <givenName>Jordan</givenName>
      <familyName>Douglas</familyName>
      <affiliation>University of Auckland</affiliation>
    </creator>
    <creator>
      <creatorName>Geoghegan, Jemma</creatorName>
      <givenName>Jemma</givenName>
      <familyName>Geoghegan</familyName>
      <affiliation>University of Otago</affiliation>
    </creator>
    <creator>
      <creatorName>Hadfield, James</creatorName>
      <givenName>James</givenName>
      <familyName>Hadfield</familyName>
      <affiliation>Fred Hutchinson Cancer Research Center</affiliation>
    </creator>
    <creator>
      <creatorName>Bouckaert, Remco</creatorName>
      <givenName>Remco</givenName>
      <familyName>Bouckaert</familyName>
      <affiliation>University of Auckland</affiliation>
    </creator>
    <creator>
      <creatorName>Storey, Matthew</creatorName>
      <givenName>Matthew</givenName>
      <familyName>Storey</familyName>
      <affiliation>Institute of Environmental Science and Research Limited</affiliation>
    </creator>
    <creator>
      <creatorName>Ren, Xiaoyun</creatorName>
      <givenName>Xiaoyun</givenName>
      <familyName>Ren</familyName>
      <affiliation>Institute of Environmental Science and Research Limited</affiliation>
    </creator>
    <creator>
      <creatorName>de Ligt, Joep</creatorName>
      <givenName>Joep</givenName>
      <familyName>de Ligt</familyName>
      <affiliation>Institute of Environmental Science and Research Limited</affiliation>
    </creator>
    <creator>
      <creatorName>French, Nigel</creatorName>
      <givenName>Nigel</givenName>
      <familyName>French</familyName>
      <affiliation>Massey University</affiliation>
    </creator>
    <creator>
      <creatorName>Welch, David</creatorName>
      <givenName>David</givenName>
      <familyName>Welch</familyName>
      <affiliation>University of Auckland</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Real-time Genomics for Tracking Severe Acute Respiratory Syndrome Coronavirus 2 Border Incursions after Virus Elimination, New Zealand</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2021</publicationYear>
  <subjects>
    <subject>covid-19; new zealand; border incursions; elimination; genomics; phylogenomics</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2021-09-01</date>
  </dates>
  <resourceType resourceTypeGeneral="JournalArticle"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/5093838</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.5093837</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;The XML file contains a model description for reproducing our phylogenetic analysis. Coronavrirus genomes have been removed from the file.&lt;/p&gt;

&lt;p&gt;We also gratefully acknowledge the Authors from the Originating laboratories responsible for obtaining the specimens, as well as the&lt;br&gt;
Submitting laboratories where the genome data were generated and shared via GISAID, on which this research is based. These Authors are named in this repository.&lt;/p&gt;</description>
  </descriptions>
</resource>
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