Dataset Open Access

Data from: Long-term isolation at a low effective population size greatly reduced genetic diversity in Gulf of California fin whales

Rivera-León, Vania E.; Urbán, Jorge; Mizroch, Sally; Brownell Jr., Robert L.; Oosting, Tom; Hao, Wensi; Palsbøll, Per J.; Bérubé, Martine


DCAT Export

<?xml version='1.0' encoding='utf-8'?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#">
  <rdf:Description rdf:about="https://zenodo.org/record/5000144">
    <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/>
    <dct:type rdf:resource="http://purl.org/dc/dcmitype/Dataset"/>
    <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/5000144</dct:identifier>
    <foaf:page rdf:resource="https://zenodo.org/record/5000144"/>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Rivera-León, Vania E.</foaf:name>
        <foaf:givenName>Vania E.</foaf:givenName>
        <foaf:familyName>Rivera-León</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Urbán, Jorge</foaf:name>
        <foaf:givenName>Jorge</foaf:givenName>
        <foaf:familyName>Urbán</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Mizroch, Sally</foaf:name>
        <foaf:givenName>Sally</foaf:givenName>
        <foaf:familyName>Mizroch</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Brownell Jr., Robert L.</foaf:name>
        <foaf:givenName>Robert L.</foaf:givenName>
        <foaf:familyName>Brownell Jr.</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Oosting, Tom</foaf:name>
        <foaf:givenName>Tom</foaf:givenName>
        <foaf:familyName>Oosting</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Hao, Wensi</foaf:name>
        <foaf:givenName>Wensi</foaf:givenName>
        <foaf:familyName>Hao</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Palsbøll, Per J.</foaf:name>
        <foaf:givenName>Per J.</foaf:givenName>
        <foaf:familyName>Palsbøll</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Bérubé, Martine</foaf:name>
        <foaf:givenName>Martine</foaf:givenName>
        <foaf:familyName>Bérubé</foaf:familyName>
      </rdf:Description>
    </dct:creator>
    <dct:title>Data from: Long-term isolation at a low effective population size greatly reduced genetic diversity in Gulf of California fin whales</dct:title>
    <dct:publisher>
      <foaf:Agent>
        <foaf:name>Zenodo</foaf:name>
      </foaf:Agent>
    </dct:publisher>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2019</dct:issued>
    <dcat:keyword>Balaenoptera physalus</dcat:keyword>
    <dcat:keyword>founding event</dcat:keyword>
    <dcat:keyword>Isolation</dcat:keyword>
    <dcat:keyword>population size</dcat:keyword>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2019-10-15</dct:issued>
    <owl:sameAs rdf:resource="https://zenodo.org/record/5000144"/>
    <adms:identifier>
      <adms:Identifier>
        <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/5000144</skos:notation>
        <adms:schemeAgency>url</adms:schemeAgency>
      </adms:Identifier>
    </adms:identifier>
    <dct:relation rdf:resource="https://doi.org/10.1038/s41598-019-48700-5"/>
    <owl:sameAs rdf:resource="https://doi.org/10.5061/dryad.s07g211"/>
    <dct:isPartOf rdf:resource="https://zenodo.org/communities/dryad"/>
    <dct:description>The Gulf of California, Mexico is home to many cetacean species, including a presumed resident population of fin whales, Balaenoptera physalus. Past studies reported very low levels of genetic diversity among Gulf of California fin whales and a significant level of genetic differentiation from con-specifics in the eastern North Pacific. The aim of the present study was to assess the degree and timing of the isolation of Gulf of California fin whales in a population genetic analysis of 18 nuclear microsatellite genotypes from 402 samples and 565 mitochondrial control region DNA sequences (including mitochondrial sequences retrieved from NCBI). The analyses revealed that the Gulf of California fin whale population was founded ~2.3 thousand years ago and has since remained at a low effective population size (~360) and isolated from the eastern North Pacific (Nem between 0.89–1.4). The low effective population size and high degree of isolation implied that Gulf of California fin whales are vulnerable to the negative effects of genetic drift, human-caused mortality and habitat change.</dct:description>
    <dct:description>&lt;div class="o-metadata__file-usage-entry"&gt;Microsatellites_GC_NP_fin_whales&lt;div class="o-metadata__file-description"&gt;Microsatellite genotypes from Rivera-León et al. (2019) Long-term isolation at a low effective population size greatly reduced genetic diversity in Gulf of California fin whales in Scientific Reports"&lt;/div&gt;&lt;div class="o-metadata__file-name"&gt;&lt;/div&gt;&lt;/div&gt;&lt;div class="o-metadata__file-usage-entry"&gt;MtDNA_sequences_Gulf_California_NP_fin_whales&lt;div class="o-metadata__file-description"&gt;Mitochondrial control region DNA sequences from Rivera-León et al. (2019) Long-term isolation at a low effective population size greatly reduced genetic diversity in Gulf of California fin whales in Scientific Reports"&lt;/div&gt;&lt;div class="o-metadata__file-name"&gt;&lt;/div&gt;&lt;/div&gt;</dct:description>
    <dct:spatial>
      <dct:Location>
        <locn:geographicName>Gulf of California</locn:geographicName>
      </dct:Location>
    </dct:spatial>
    <dct:spatial>
      <dct:Location>
        <locn:geographicName>eastern North Pacific</locn:geographicName>
      </dct:Location>
    </dct:spatial>
    <dct:spatial>
      <dct:Location>
        <locn:geographicName>Mexico</locn:geographicName>
      </dct:Location>
    </dct:spatial>
    <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/>
    <dct:accessRights>
      <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess">
        <rdfs:label>Open Access</rdfs:label>
      </dct:RightsStatement>
    </dct:accessRights>
    <dcat:distribution>
      <dcat:Distribution>
        <dct:license rdf:resource="https://creativecommons.org/publicdomain/zero/1.0/legalcode"/>
        <dcat:accessURL rdf:resource="https://zenodo.org/record/5000144"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5061/dryad.s07g211"/>
        <dcat:byteSize>30002</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/5000144/files/Microsatellites_GC_NP_fin_whales.txt"/>
        <dcat:mediaType>text/plain</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5061/dryad.s07g211"/>
        <dcat:byteSize>168810</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/5000144/files/MtDNA_sequences_Gulf_California_NP_fin_whales.fas"/>
      </dcat:Distribution>
    </dcat:distribution>
  </rdf:Description>
</rdf:RDF>
26
3
views
downloads
Views 26
Downloads 3
Data volume 367.6 kB
Unique views 21
Unique downloads 3

Share

Cite as