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\n\n\nA new version with coordinates has been added.
\n\nPlease download the datasets uploaded under the new version using this link: https://doi.org/10.5281/zenodo.4953761
\n
\n\n
Description of the datasets
\n\nThe file 00_MUSTB_field_data_model.docx contains the data model according to which the data collected in the context of the MUSTB field data collection were reported to EFSA. The current data model description includes some modifications with respect to the specifications published before the beginning of the project (EFSA, 2017, https://doi.org/10.2903/sp.efsa.2017.EN-1234). All the tables included in the data model are published here in csv format. The underlying schemas are also published in xsd format.
\n\nSites: General information about the sites where the data collection took place;
\n\nPolygons: General information about the polygons where the botanical survey took place.
\n\nTable I: Pesticide application, reporting data on experimental spraying events;
\n\nTable II: Resource providing unit and landscape fitness, reporting data on abundance of flowering plants in polygons mostly within 1.5 km, but in some cases up to 3 km of the experimental colony;
\n\nTable III: Master list of all hives included in the study;
\n\nTable IV: Colony management, reporting the log of the beekeeper regarding input (if material was added to the hive: e.g. empty frames, chemicals for varroa treatment, sugar), output (if material was removed from the hive, e.g. honey combs, supers), queen loss, swarming, or clinical signs observed in the experimental hives;
\n\nTable V: Hive inspection, reporting data on in-hive measurements in the experimental colonies. This table contained several types of data, including:
\n\nTable VI: SSD2, reporting data on results of laboratory analyses of pollen, pesticide residues and parasites/pathogens. These four types of laboratory analyses involved different methods, and were reported according to different standards. Therefore, a number of the fields in the technical specifications for the SSD2 table (EFSA, 2017) were not applicable for records reporting results of some analyses, in particular palynological, parasite and pathogen analyses. These fields were left empty;
\n\nTable VII: Colony observation, reporting observations of honey bee waggle dances from observation hives. Orientation denotes the angle of the waggling phase relative to the vertical axis on the comb. Direction denotes the actual direction in the landscape, as calculated from the orientation of the waggle dance.
\n\nIn all the csv files, columns with the suffix "_desc" have been included, where relevant, to include the name corresponding to the EFSA controlled terminology used in the previous column (e.g. resUnit contains EFSA term codes while resUnit_desc contains the term names).
\n\nData storage
\n\nAll data collected during the project was stored in a relational database. The database was developed in .NET Entity Framework Core, ran on a PostgreSQL, and was hosted by Amazon Web Service during the whole duration of the project development. Data could be imported or entered manually in the database through a web form. Administrators could create new users and administrators, new sites, and new colonies, i.e., administrators were allowed to enter or change data of all tables. Users were allowed to enter data, and could view, retrieve, and modify their own data of all tables, except for Table III (description of experimental colonies). Administrators could view and retrieve all data. Data was retrieved in CSV and XML formats, and were structured to secure a smooth transmission of data to the Data Collection Framework of EFSA. Furthermore, data flow from the field data collection to the development of ApisRAM was secured by direct communication between the field and modelling teams.
", "languages": [ { "id": "eng", "title": { "en": "English" } } ], "publication_date": "2021-07-15", "publisher": "Zenodo", "related_identifiers": [ { "identifier": "10.2903/sp.efsa.2017.EN-1234", "relation_type": { "id": "references", "title": { "de": "Referenziert", "en": "References" } }, "resource_type": { "id": "publication-report", "title": { "de": "Bericht", "en": "Report" } }, "scheme": "doi" }, { "identifier": "10.2903/sp.efsa.2021.EN-6695", "relation_type": { "id": "cites", "title": { "de": "Zitiert", "en": "Cites" } }, "resource_type": { "id": "publication-report", "title": { "de": "Bericht", "en": "Report" } }, "scheme": "doi" }, { "identifier": "10.2903/sp.efsa.2021.EN-6694", "relation_type": { "id": "ispartof", "title": { "de": "Ist Teil von", "en": "Is part of" } }, "resource_type": { "id": "publication-report", "title": { "de": "Bericht", "en": "Report" } }, "scheme": "doi" }, { "identifier": "10.2903/sp.efsa.2016.EN-1069", "relation_type": { "id": "ispartof", "title": { "de": "Ist Teil von", "en": "Is part of" } }, "resource_type": { "id": "publication-report", "title": { "de": "Bericht", "en": "Report" } }, "scheme": "doi" }, { "identifier": "10.2903/j.efsa.2021.6607", "relation_type": { "id": "cites", "title": { "de": "Zitiert", "en": "Cites" } }, "resource_type": { "id": "publication-article", "title": { "de": "Zeitschriftenartikel", "en": "Journal article" } }, "scheme": "doi" }, { "identifier": "10.5281/zenodo.779880", "relation_type": { "id": "references", "title": { "de": "Referenziert", "en": "References" } }, "resource_type": { "id": "dataset", "title": { "de": "Datensatz", "en": "Dataset" } }, "scheme": "doi" } ], "resource_type": { "id": "dataset", "title": { "de": "Datensatz", "en": "Dataset" } }, "rights": [ { "description": { "en": "The Creative Commons Attribution license allows re-distribution and re-use of a licensed work on the condition that the creator is appropriately credited." }, "icon": "cc-by-icon", "id": "cc-by-4.0", "props": { "scheme": "spdx", "url": "https://creativecommons.org/licenses/by/4.0/legalcode" }, "title": { "en": "Creative Commons Attribution 4.0 International" } } ], "subjects": [ { "subject": "landscape mapping" }, { "subject": "floral resources" }, { "subject": "population assessment" }, { "subject": "observation hive" }, { "subject": "pesticides exposure" }, { "subject": "flight activity" }, { "subject": "image analysis" } ], "title": "Research project on field data collection for honey bee colony model evaluation - datasets" }, "parent": { "access": { "owned_by": { "user": 40429 } }, "communities": { "default": "e835d5a6-736e-4331-9727-fc97f7b4878b", "entries": [ { "access": { "member_policy": "open", "members_visibility": "public", "record_policy": "open", "review_policy": "open", "visibility": "public" }, "children": { "allow": false }, "created": "2016-11-10T11:04:06.919144+00:00", "custom_fields": {}, "deletion_status": { "is_deleted": false, "status": "P" }, "id": "e835d5a6-736e-4331-9727-fc97f7b4878b", "links": {}, "metadata": { "curation_policy": "Items subject to copyright restrictions should only be shared if these rights are not infringed by publishing on an open platform. All other evidence and supporting materials of relevant for food and feed safety will be accepted if the metadata provided is completed according to the guideline (https://doi.org/10.5281/zenodo.889741).
\r\n", "page": "The Knowledge Junction is a curated, open repository for the exchange of evidence and supporting materials used in food and feed safety risk assessments.
\r\n\r\nOur aim is to improve transparency, reproducibility and evidence reuse.
\r\n\r\nAnyone can use the platform and your submissions are welcome too, including:
\r\n\r\nEach submission receives a digital object identifier (DOI), requires metadata acknowledging authors and contributors and has a license specifying the conditions of use.
\r\nIn this way the reuse of any object deposited can be tracked by the provider.
The content of this repository can be used by EFSA’s panels and working groups and any other interested parties when preparing for new risk assessments.
\r\n\r\nThe Knowledge Junction is a curated, open repository for the exchange of evidence and supporting materials used in food and feed safety risk assessments.
\r\n\r\nOur aim is to improve transparency, reproducibility and evidence reuse.
\r\n\r\nAnyone can use the platform and your submissions are welcome too, including:
\r\n\r\nEach submission receives a digital object identifier (DOI), requires metadata acknowledging authors and contributors and has a license specifying the conditions of use.
\r\nIn this way the reuse of any object deposited can be tracked by the provider.
The content of this repository can be used by EFSA’s panels and working groups and any other interested parties when preparing for new risk assessments.
\r\n\r\n\r\n\r\n
\r\n\r\n
Disclaimer: The European Food Safety Authority (EFSA) curates the Knowledge Junction to facilitate the exchange of evidence and supporting materials relevant for food and feed safety risk assessments. In addition to the information provided on its website: http://www.efsa.europa.eu.The linking policy, copyright policy and tweeter policy of EFSA’s website apply mutatis mutandis and are available at: http://www.efsa.europa.eu/en/legalnotice. The Notice on personal data protection and confidentiality also apply equally to the present community.
\r\n\r\nAll links are up to date at the time of the publication. If errors are brought to EFSA’s attention, EFSA will try to correct them. However, please note that EFSA may not be held liable for errors, inaccuracies or inconsistencies with regard to texts available through the community being different from its scientific and administrative documents officially adopted and/or issued and/or endorsed. Nor may it be held liable for information provided by third parties for which EFSA is not responsible.
\r\n\r\nAll persons reproducing, redistributing, exploiting or making commercial use of digital objects published in the community are expected to adhere to the terms and conditions described by the license assigned to each published object. EFSA is not responsible for any misuse of the documents and files.
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