biscuit-0.1.3.zip
biscuit
.git
HEAD
23 Bytes
branches
config
303 Bytes
description
73 Bytes
hooks
applypatch-msg.sample
478 Bytes
commit-msg.sample
896 Bytes
post-update.sample
189 Bytes
pre-applypatch.sample
424 Bytes
pre-commit.sample
1.6 kB
pre-push.sample
1.3 kB
pre-rebase.sample
5.0 kB
prepare-commit-msg.sample
1.2 kB
update.sample
3.6 kB
index
9.2 kB
info
exclude
240 Bytes
logs
HEAD
181 Bytes
refs
heads
master
181 Bytes
remotes
origin
HEAD
181 Bytes
objects
info
pack
pack-2b8fa4c08e49d402f37b15d05df7fac6f0ff7411.idx
19.6 kB
pack-2b8fa4c08e49d402f37b15d05df7fac6f0ff7411.pack
480.3 kB
packed-refs
361 Bytes
refs
heads
master
41 Bytes
remotes
origin
HEAD
32 Bytes
tags
Makefile
4.3 kB
README.md
141 Bytes
bin
biscuit
474.1 kB
include
aln
QSufSort.h
1.6 kB
bntseq.h
2.9 kB
bwa.h
2.5 kB
bwamem.h
9.6 kB
bwt.h
5.5 kB
bwtgap.h
999 Bytes
bwtsw2.h
1.5 kB
malloc_wrap.h
1.2 kB
utils.h
3.8 kB
biscuit.h
72 Bytes
encode.h
17.7 kB
klib
bwt_lite.h
653 Bytes
bwtaln.h
3.8 kB
kbtree.h
15.9 kB
khash.h
20.9 kB
kseq.h
8.9 kB
ksort.h
9.7 kB
kstring.h
4.5 kB
ksw.h
5.1 kB
kvec.h
2.9 kB
pileup.h
5.0 kB
refseq.h
2.8 kB
stats.h
1.2 kB
wints.h
567 Bytes
wqueue.h
3.7 kB
wstr.h
1.0 kB
wstring.h
5.4 kB
wvec.h
16.9 kB
wzcbs.h
275 Bytes
wzhmm.h
1.4 kB
lib
aln
QSufSort.c
12.6 kB
QSufSort.o
4.7 kB
bntseq.c
21.1 kB
bntseq.o
18.3 kB
bwa.c
22.5 kB
bwa.o
26.5 kB
bwamem.c
50.5 kB
bwamem.o
86.3 kB
bwamem_extra.c
5.6 kB
bwamem_extra.o
11.3 kB
bwamem_pair.c
17.6 kB
bwamem_pair.o
15.9 kB
bwashm.c
5.8 kB
bwashm.o
6.5 kB
bwt.c
16.0 kB
bwt.o
15.2 kB
bwt_gen.c
53.9 kB
bwt_gen.o
20.4 kB
bwtgap.c
9.2 kB
bwtgap.o
7.2 kB
bwtindex.c
10.5 kB
bwtindex.o
10.1 kB
bwtsw2_aux.c
25.0 kB
bwtsw2_aux.o
26.9 kB
bwtsw2_chain.c
3.1 kB
bwtsw2_chain.o
8.2 kB
bwtsw2_core.c
19.0 kB
bwtsw2_core.o
25.3 kB
bwtsw2_main.c
3.8 kB
bwtsw2_main.o
5.0 kB
bwtsw2_pair.c
10.3 kB
bwtsw2_pair.o
8.1 kB
fastmap.c
20.5 kB
fastmap.o
16.8 kB
is.c
6.7 kB
is.o
5.8 kB
libaln.a
348.2 kB
malloc_wrap.c
1.4 kB
malloc_wrap.o
2.1 kB
utils.c
6.9 kB
utils.o
19.5 kB
klib
klib.a
29.4 kB
kopen.c
9.7 kB
kopen.o
7.8 kB
kstring.c
5.4 kB
kstring.o
4.6 kB
ksw.c
26.1 kB
ksw.o
13.3 kB
kthread.c
3.6 kB
kthread.o
3.0 kB
libsamtools-0.1.19
Makefile
651 Bytes
bam.c
16.0 kB
bam.h
25.8 kB
bam.o
25.4 kB
bam_aux.c
5.1 kB
bam_aux.o
8.5 kB
bam_endian.h
1.1 kB
bam_import.c
16.5 kB
bam_import.o
17.5 kB
bam_index.c
23.0 kB
bam_index.o
26.9 kB
bam_pileup.c
13.0 kB
bam_pileup.o
9.6 kB
bam_rmdup.c
5.8 kB
bam_rmdup.o
11.9 kB
bam_rmdupse.c
4.1 kB
bam_rmdupse.o
9.0 kB
bam_sort.c
18.8 kB
bam_sort.o
32.5 kB
bgzf.c
21.1 kB
bgzf.h
6.3 kB
bgzf.o
11.4 kB
faidx.c
11.1 kB
faidx.h
3.2 kB
faidx.o
12.2 kB
khash.h
17.8 kB
klist.h
3.5 kB
knetfile.c
18.3 kB
knetfile.h
1.6 kB
knetfile.o
10.6 kB
kseq.h
8.8 kB
ksort.h
10.1 kB
kstring.c
5.4 kB
kstring.h
4.5 kB
kstring.o
4.6 kB
libsam.a
218.6 kB
main.c
4.8 kB
razf.c
24.3 kB
razf.h
4.1 kB
razf.o
12.4 kB
sam.c
6.1 kB
sam.h
2.7 kB
sam.o
6.1 kB
sam_header.c
21.2 kB
sam_header.h
1.6 kB
sam_header.o
14.3 kB
utils
encode.c
25.7 kB
encode.o
6.3 kB
libutils.a
29.6 kB
stats.c
10.3 kB
stats.o
14.1 kB
wzcbs.c
1.3 kB
wzhmm.c
6.6 kB
wzhmm.o
7.9 kB
scripts
pybiscuit.py
8.5 kB
src
archive
correct_bsstrand.c
7.4 kB
get_unmapped.c
1.9 kB
hemifinder.c
12.0 kB
sample_trinuc.c
13.4 kB
copyseg.c
1.9 kB
epiread.c
16.8 kB
epiread.o
17.9 kB
indel_realign.c
2.8 kB
main.c
4.0 kB
main.o
3.8 kB
markdup.c
18.4 kB
markdup.o
17.3 kB
ndr.c
7.3 kB
ndr.o
8.8 kB
pileup.c
49.6 kB
pileup.o
51.7 kB
vcf2bed.c
13.3 kB
vcf2bed.o
12.6 kB
test.sh
2.8 kB