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A Web service for executable research compendia enables reproducible publications and transparent reviews in geospatial sciences

Nüst, Daniel


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  <identifier identifierType="DOI">10.5281/zenodo.4818120</identifier>
  <creators>
    <creator>
      <creatorName>Nüst, Daniel</creatorName>
      <givenName>Daniel</givenName>
      <familyName>Nüst</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-0024-5046</nameIdentifier>
      <affiliation>Institute for Geoinformatics, University of Münster, Münster, Germany</affiliation>
    </creator>
  </creators>
  <titles>
    <title>A Web service for executable research compendia enables reproducible publications and transparent reviews in geospatial sciences</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2021</publicationYear>
  <subjects>
    <subject>reproducible research</subject>
    <subject>scholarly communication</subject>
    <subject>reproducibility</subject>
    <subject>executable research compendium</subject>
    <subject>ERC</subject>
    <subject>containerisation</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2021-07-08</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Preprint"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/4818120</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsCompiledBy">https://zivgitlab.uni-muenster.de/d_nues01/architecture-paper/</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.4818119</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/o2r</relatedIdentifier>
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  <version>1</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;The Executable Research Compendium (ERC) is a concept for packaging data, code, text, and user interface configurations in a single package to increase transparency, reproducibility, and reusability of computational research. This article introduces the ERC reproducibility service (ERS) for a publication workflow enhanced by ERCs. The ERS connects with existing scientific infrastructures and was deployed and tested with a focus on data and visualisation methods for open geospatial sciences. We describe the architecture of a reference implementation for the reproducibility service, including the created Web API. We critically discuss both the project set-up and features of ERC and ERS, and examine them in the light of various classifications for reproducible research. The ERC and ERS are found to be a powerful tool to improve reproducibility and thereby enable better investigating and understanding of computational workflows during peer review. We derive lessons learned and challenges for future scholarly publishing of computer-based geospatial research.&lt;/p&gt;</description>
  </descriptions>
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