Dataset Open Access

Sulfur K-edge X-ray absorption near-edge spectral analysis of thiourea free ligand and its Zn(II), Co(II), and Ni(II) complexes

Matt Queen; Farideh Jalilehvand; Robert K Szilagyi


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">sulfur K-edge XANES</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">thiourea complexes</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">non-innocent S-ligand</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">transition dipole integral</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">metal-ligand bond covalency</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">ground electronic state</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">molecular orbital composition</subfield>
  </datafield>
  <controlfield tag="005">20210519014811.0</controlfield>
  <datafield tag="500" ind1=" " ind2=" ">
    <subfield code="a">manuscript submitted for publication</subfield>
  </datafield>
  <controlfield tag="001">4770724</controlfield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">University of Calgary</subfield>
    <subfield code="a">Farideh Jalilehvand</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Montana State University</subfield>
    <subfield code="0">(orcid)0000-0002-9314-6222</subfield>
    <subfield code="a">Robert K Szilagyi</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">91963200</subfield>
    <subfield code="z">md5:1626b72a0039782c6f0055adb9829b5d</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/DFT_CALCULATIONS.zip</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">339945</subfield>
    <subfield code="z">md5:f26e3e11b62b20930bdd67739a261c4f</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/RAW_DATA.zip</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1225</subfield>
    <subfield code="z">md5:40ddd90b77fb081af78563bfd2a27c7d</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/__README.txt</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">5521154</subfield>
    <subfield code="z">md5:9019c6d4c6da246ea0c6a53f536b0550</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/spectral modeling summary.xlsx</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">2694100</subfield>
    <subfield code="z">md5:315da1c5ff66bd410e8f6f6b4bd4289e</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/SPECTRAL_MODELS.zip</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1078272</subfield>
    <subfield code="z">md5:81a8981495d21b890700b42a74e63a2c</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/transition dipole.xls</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">235359</subfield>
    <subfield code="z">md5:3cf2a8c64c89662a0956540b7c59ca54</subfield>
    <subfield code="u">https://zenodo.org/record/4770724/files/XRD_STRUCTURES.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2021-05-18</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">openaire_data</subfield>
    <subfield code="o">oai:zenodo.org:4770724</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="u">Montana State University - Billings</subfield>
    <subfield code="a">Matt Queen</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">Sulfur K-edge X-ray absorption near-edge spectral analysis of thiourea free ligand and its Zn(II), Co(II), and Ni(II) complexes</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://creativecommons.org/licenses/by/4.0/legalcode</subfield>
    <subfield code="a">Creative Commons Attribution 4.0 International</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;&lt;em&gt;Electronic supporting information for the analysis and interpretation of sulfur K-edge X-ray absorption near-edge spectra of thiourea free ligand and its [Zn(TU)&lt;sub&gt;4&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt;, [Co(TU)&lt;sub&gt;4&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt;, and [Ni(TU)&lt;sub&gt;6&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt; complexes.&lt;/em&gt;&lt;/p&gt;

&lt;blockquote&gt;
&lt;p&gt;Sulfur K-edge X-ray absorption spectroscopy (XAS) was employed to experimentally define the nature of coordinative bond between thiourea (TU) or thiocarbamide ligand and Zn&lt;sup&gt;2+&lt;/sup&gt;, Co&lt;sup&gt;2+&lt;/sup&gt;, and Ni&lt;sup&gt;2+ &lt;/sup&gt;ions in distorted tetrahedral and octahedral homoleptic coordination environments. Comparisons of XAS spectra of the free TU ligand, [Zn(TU)&lt;sub&gt;4&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt;, [Co(TU)&lt;sub&gt;4&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt;, and [Ni(TU)&lt;sub&gt;6&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt; complexes clearly identify spectral features emerging from the structural non-innocent TM&lt;sup&gt;2+&lt;/sup&gt;&amp;ndash;S(TU) bonding. Quantitative analysis of pre-edge intensities describes the covalency of Ni&lt;sup&gt;2+&lt;/sup&gt;&amp;ndash; and Co&lt;sup&gt;2+&lt;/sup&gt;&amp;ndash;S(TU) bonding to be at most 23% and 9% as expressed by the S 3p contributions per 3d electron hole. Using relevant Ni&lt;sup&gt;2+&lt;/sup&gt; complexes with dithiocarbamate and thioether ligands, we evaluated the empirical S 1s&amp;rarr;3p transition dipole integrals developed for sulfur ligands and its dependence on heteroatom substitutions. With the aid of density functional theory-based ground electronic state calculations, we found evidence for the need of using a transition dipole that is dependent on the presence of conjugated heteroatom (N) substitution in the S-ligands.&lt;/p&gt;
&lt;/blockquote&gt;

&lt;p&gt;&lt;em&gt;Table of Contents:&lt;/em&gt;&lt;/p&gt;

&lt;p&gt;Worksheets &amp;quot;transition dipole&amp;quot; and &amp;quot;spectral modeling summary&amp;quot; contain data for empirical S 1s-&amp;gt;3p transition dipole integral estimates and summary of spectral modeling, respectively.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;RAW_DATA folder:&lt;/strong&gt;&lt;br&gt;
ASCII formatted S K-edge XAS data from BL 4-3 of SSRL, and data obtained for the [Ni(TU)&lt;sub&gt;6&lt;/sub&gt;]&lt;sup&gt;2+&lt;/sup&gt; complex at the double-crystal monochromator beamline (formerly Canadian Beamline) of Synchrotron Research Center (the home of Aladdin), in Stoughton, Wisconsin.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;SPECTRAL_MODELS folder&lt;/strong&gt;&lt;br&gt;
Electronic spreadsheets, PeakFit spectral fitting templates, spectra as user-defined functions, quantitative analysis of pre-edge feature intensities&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;XRD_STRUCTURES folder&lt;/strong&gt;&lt;br&gt;
Xmol (XYZ) and DSViewerPro (MSV) files for the analysis of the crystal packing environment of TU complexes.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;DFT_CALCULATIONS&lt;/strong&gt;&lt;br&gt;
Gaussian09 log files for free thiourea, Co&lt;sup&gt;(II)&lt;/sup&gt; and Ni&lt;sup&gt;(II)&lt;/sup&gt; complexes at BP86/def2TZVP, B3LYP/def2TZVP, and TPSS/def2TZVP levels of theory; frequency calculations for IR vibrational spectral simulations.&lt;/p&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="a">10.5281/zenodo.4770723</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.4770724</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">dataset</subfield>
  </datafield>
</record>
119
59
views
downloads
All versions This version
Views 119119
Downloads 5959
Data volume 882.3 MB882.3 MB
Unique views 109109
Unique downloads 4040

Share

Cite as