Dataset Open Access
Matt Queen;
Farideh Jalilehvand;
Robert K Szilagyi
{ "files": [ { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/DFT_CALCULATIONS.zip" }, "checksum": "md5:1626b72a0039782c6f0055adb9829b5d", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "DFT_CALCULATIONS.zip", "type": "zip", "size": 91963200 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/RAW_DATA.zip" }, "checksum": "md5:f26e3e11b62b20930bdd67739a261c4f", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "RAW_DATA.zip", "type": "zip", "size": 339945 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/__README.txt" }, "checksum": "md5:40ddd90b77fb081af78563bfd2a27c7d", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "__README.txt", "type": "txt", "size": 1225 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/spectral%20modeling%20summary.xlsx" }, "checksum": "md5:9019c6d4c6da246ea0c6a53f536b0550", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "spectral modeling summary.xlsx", "type": "xlsx", "size": 5521154 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/SPECTRAL_MODELS.zip" }, "checksum": "md5:315da1c5ff66bd410e8f6f6b4bd4289e", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "SPECTRAL_MODELS.zip", "type": "zip", "size": 2694100 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/transition%20dipole.xls" }, "checksum": "md5:81a8981495d21b890700b42a74e63a2c", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "transition dipole.xls", "type": "xls", "size": 1078272 }, { "links": { "self": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec/XRD_STRUCTURES.zip" }, "checksum": "md5:3cf2a8c64c89662a0956540b7c59ca54", "bucket": "5527e770-a9d8-41c6-90fc-323f0fc553ec", "key": "XRD_STRUCTURES.zip", "type": "zip", "size": 235359 } ], "owners": [ 38528 ], "doi": "10.5281/zenodo.4770724", "stats": { "version_unique_downloads": 40.0, "unique_views": 109.0, "views": 119.0, "version_views": 119.0, "unique_downloads": 40.0, "version_unique_views": 109.0, "volume": 882327882.0, "version_downloads": 59.0, "downloads": 59.0, "version_volume": 882327882.0 }, "links": { "doi": "https://doi.org/10.5281/zenodo.4770724", "conceptdoi": "https://doi.org/10.5281/zenodo.4770723", "bucket": "https://zenodo.org/api/files/5527e770-a9d8-41c6-90fc-323f0fc553ec", "conceptbadge": "https://zenodo.org/badge/doi/10.5281/zenodo.4770723.svg", "html": "https://zenodo.org/record/4770724", "latest_html": "https://zenodo.org/record/4770724", "badge": "https://zenodo.org/badge/doi/10.5281/zenodo.4770724.svg", "latest": "https://zenodo.org/api/records/4770724" }, "conceptdoi": "10.5281/zenodo.4770723", "created": "2021-05-18T17:33:09.500803+00:00", "updated": "2021-05-19T01:48:11.933403+00:00", "conceptrecid": "4770723", "revision": 2, "id": 4770724, "metadata": { "access_right_category": "success", "doi": "10.5281/zenodo.4770724", "description": "<p><em>Electronic supporting information for the analysis and interpretation of sulfur K-edge X-ray absorption near-edge spectra of thiourea free ligand and its [Zn(TU)<sub>4</sub>]<sup>2+</sup>, [Co(TU)<sub>4</sub>]<sup>2+</sup>, and [Ni(TU)<sub>6</sub>]<sup>2+</sup> complexes.</em></p>\n\n<blockquote>\n<p>Sulfur K-edge X-ray absorption spectroscopy (XAS) was employed to experimentally define the nature of coordinative bond between thiourea (TU) or thiocarbamide ligand and Zn<sup>2+</sup>, Co<sup>2+</sup>, and Ni<sup>2+ </sup>ions in distorted tetrahedral and octahedral homoleptic coordination environments. Comparisons of XAS spectra of the free TU ligand, [Zn(TU)<sub>4</sub>]<sup>2+</sup>, [Co(TU)<sub>4</sub>]<sup>2+</sup>, and [Ni(TU)<sub>6</sub>]<sup>2+</sup> complexes clearly identify spectral features emerging from the structural non-innocent TM<sup>2+</sup>–S(TU) bonding. Quantitative analysis of pre-edge intensities describes the covalency of Ni<sup>2+</sup>– and Co<sup>2+</sup>–S(TU) bonding to be at most 23% and 9% as expressed by the S 3p contributions per 3d electron hole. Using relevant Ni<sup>2+</sup> complexes with dithiocarbamate and thioether ligands, we evaluated the empirical S 1s→3p transition dipole integrals developed for sulfur ligands and its dependence on heteroatom substitutions. With the aid of density functional theory-based ground electronic state calculations, we found evidence for the need of using a transition dipole that is dependent on the presence of conjugated heteroatom (N) substitution in the S-ligands.</p>\n</blockquote>\n\n<p><em>Table of Contents:</em></p>\n\n<p>Worksheets "transition dipole" and "spectral modeling summary" contain data for empirical S 1s->3p transition dipole integral estimates and summary of spectral modeling, respectively.</p>\n\n<p><strong>RAW_DATA folder:</strong><br>\nASCII formatted S K-edge XAS data from BL 4-3 of SSRL, and data obtained for the [Ni(TU)<sub>6</sub>]<sup>2+</sup> complex at the double-crystal monochromator beamline (formerly Canadian Beamline) of Synchrotron Research Center (the home of Aladdin), in Stoughton, Wisconsin.</p>\n\n<p><strong>SPECTRAL_MODELS folder</strong><br>\nElectronic spreadsheets, PeakFit spectral fitting templates, spectra as user-defined functions, quantitative analysis of pre-edge feature intensities</p>\n\n<p><strong>XRD_STRUCTURES folder</strong><br>\nXmol (XYZ) and DSViewerPro (MSV) files for the analysis of the crystal packing environment of TU complexes.</p>\n\n<p><strong>DFT_CALCULATIONS</strong><br>\nGaussian09 log files for free thiourea, Co<sup>(II)</sup> and Ni<sup>(II)</sup> complexes at BP86/def2TZVP, B3LYP/def2TZVP, and TPSS/def2TZVP levels of theory; frequency calculations for IR vibrational spectral simulations.</p>", "contributors": [], "title": "Sulfur K-edge X-ray absorption near-edge spectral analysis of thiourea free ligand and its Zn(II), Co(II), and Ni(II) complexes", "license": { "id": "CC-BY-4.0" }, "notes": "manuscript submitted for publication", "relations": { "version": [ { "count": 1, "index": 0, "parent": { "pid_type": "recid", "pid_value": "4770723" }, "is_last": true, "last_child": { "pid_type": "recid", "pid_value": "4770724" } } ] }, "version": "1.0", "keywords": [ "sulfur K-edge XANES", "thiourea complexes", "non-innocent S-ligand", "transition dipole integral", "metal-ligand bond covalency", "ground electronic state", "molecular orbital composition" ], "publication_date": "2021-05-18", "creators": [ { "affiliation": "Montana State University - Billings", "name": "Matt Queen" }, { "affiliation": "University of Calgary", "name": "Farideh Jalilehvand" }, { "orcid": "0000-0002-9314-6222", "affiliation": "Montana State University", "name": "Robert K Szilagyi" } ], "access_right": "open", "resource_type": { "type": "dataset", "title": "Dataset" }, "related_identifiers": [ { "scheme": "doi", "identifier": "10.5281/zenodo.4770723", "relation": "isVersionOf" } ] } }
All versions | This version | |
---|---|---|
Views | 119 | 119 |
Downloads | 59 | 59 |
Data volume | 882.3 MB | 882.3 MB |
Unique views | 109 | 109 |
Unique downloads | 40 | 40 |