There is a newer version of this record available.

Software Open Access

epiforecasts/covidregionaldata: JHU and Google support

Sam Abbott; Joe Palmer; Kath Sherratt; Jonnie-Bevan; Richard Martin-Nielsen; hamishgibbs; Flavio Finger; Hugo Gruson; Sebastian Funk; Joel Hellewell; Paul Campbell; Richard Boyes; Patrick Barks; Maria; Haze Lee; joeHickson; Sophie Meakin


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <controlfield tag="005">20210702091156.0</controlfield>
  <controlfield tag="001">4742548</controlfield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Royal Holloway University of London</subfield>
    <subfield code="a">Joe Palmer</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">London School of Hygiene and Tropical Medicine</subfield>
    <subfield code="a">Kath Sherratt</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Jonnie-Bevan</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Richard Martin-Nielsen</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">LSHTM</subfield>
    <subfield code="a">hamishgibbs</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Flavio Finger</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Hugo Gruson</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">London School of Hygiene &amp; Tropical Medicine</subfield>
    <subfield code="a">Sebastian Funk</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">LSHTM</subfield>
    <subfield code="a">Joel Hellewell</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">@epicentre-msf</subfield>
    <subfield code="a">Paul Campbell</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Centrica PLC</subfield>
    <subfield code="a">Richard Boyes</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">@epicentre-msf</subfield>
    <subfield code="a">Patrick Barks</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">EBPI @uzh</subfield>
    <subfield code="a">Maria</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">@goodoc</subfield>
    <subfield code="a">Haze Lee</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">@MetOffice</subfield>
    <subfield code="a">joeHickson</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Sophie Meakin</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1113304</subfield>
    <subfield code="z">md5:65d7ba6a3414d0363ab9cf177492ebf9</subfield>
    <subfield code="u">https://zenodo.org/record/4742548/files/epiforecasts/covidregionaldata-v0.9.1.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2021-05-07</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">software</subfield>
    <subfield code="p">user-covid-19</subfield>
    <subfield code="o">oai:zenodo.org:4742548</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="u">@epiforecasts @cmmid</subfield>
    <subfield code="a">Sam Abbott</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">epiforecasts/covidregionaldata: JHU and Google support</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-covid-19</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="a">Other (Open)</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;This release adds support for data sets from John Hopkins University and the Google open data project. Both of these sources aggregate a range of data at national and subnational levels. It also contains a range of small fixes and improvements to documentation. Finally, this release adds optional data processing which will be extended in future releases (contributions warmly welcomed).&lt;/p&gt;
&lt;p&gt;Thanks to @joseph-palmer, @RichardMN, and @kathsherratt for contributions towards this release.&lt;/p&gt;
New features
&lt;ul&gt;
&lt;li&gt;Support for data provided by John Hopkins University (by @joseph-palmer).&lt;/li&gt;
&lt;li&gt;Support for data provided by Google COVID-19 open data project (by @joseph-palmer).&lt;/li&gt;
&lt;li&gt;Added a &lt;code&gt;available_regions&lt;/code&gt; method for all classes that shows level 1 regions with data available for the region of interest. This is of particular use when combined with the JHU or Google datasets where processing a large number of regions that are not required can take some time. &lt;/li&gt;
&lt;li&gt;Adds support for JHU or Google data to &lt;code&gt;get_national_data()&lt;/code&gt;. This may also now be used to access lower level data from these sources  but it may be better to instead use the classes directly or via &lt;code&gt;initialise_dataclass()&lt;/code&gt;.&lt;/li&gt;
&lt;/ul&gt;
Other changes
&lt;ul&gt;
&lt;li&gt;The optional downloading of NHS region data in the &lt;code&gt;UK()&lt;/code&gt; has been improved to include both the dynamic data previously supported and the archive document now produced (by @kathsherratt).&lt;/li&gt;
&lt;li&gt;The examples for the &lt;code&gt;UK()&lt;/code&gt; class have been expanded to better showcase the package functionality.&lt;/li&gt;
&lt;li&gt;The documentation and examples for &lt;code&gt;get_regional_data()&lt;/code&gt;, &lt;code&gt;get_national_data()&lt;/code&gt;, and &lt;code&gt;get_available_datasets()&lt;/code&gt; has been expanded with a focus on increasing the visibility of the underlying package structure.&lt;/li&gt;
&lt;li&gt;The documentation and examples for &lt;code&gt;initialise_dataclass()&lt;/code&gt;, &lt;code&gt;DataClass()&lt;/code&gt;, and &lt;code&gt;CountryDataClass()&lt;/code&gt; has been expanded and improved.&lt;/li&gt;
&lt;li&gt;Improvements to the linking of documentation for related functions and classes.&lt;/li&gt;
&lt;li&gt;Improvements to the documentation for contributors (by @RichardMN).&lt;/li&gt;
&lt;li&gt;Improvements to the &lt;code&gt;pkgdown&lt;/code&gt; documentation to organise packages into appropriate subcategories.&lt;/li&gt;
&lt;/ul&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">url</subfield>
    <subfield code="i">isSupplementTo</subfield>
    <subfield code="a">https://github.com/epiforecasts/covidregionaldata/tree/v0.9.1</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="a">10.5281/zenodo.3957539</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.4742548</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">software</subfield>
  </datafield>
</record>
7,199
354
views
downloads
All versions This version
Views 7,19952
Downloads 3542
Data volume 201.4 MB2.2 MB
Unique views 5,54949
Unique downloads 2832

Share

Cite as