Zenodo.org will be unavailable for 2 hours on September 29th from 06:00-08:00 UTC. See announcement.

Software Open Access

danlwarren/ENMTools: ENMTools 1.0.4

Dan Warren; Russell Dinnage; Nicholas J. Matzke; Nicholas Huron; John Baumgartner


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <controlfield tag="005">20210507134809.0</controlfield>
  <controlfield tag="001">4741547</controlfield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Australian National University</subfield>
    <subfield code="a">Russell Dinnage</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">The Australian National University</subfield>
    <subfield code="a">Nicholas J. Matzke</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Temple University</subfield>
    <subfield code="a">Nicholas Huron</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">University of Melbourne</subfield>
    <subfield code="a">John Baumgartner</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">7367773</subfield>
    <subfield code="z">md5:902a537c0ed2679ba86bc2d101a51117</subfield>
    <subfield code="u">https://zenodo.org/record/4741547/files/danlwarren/ENMTools-1.0.4.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2021-05-07</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">software</subfield>
    <subfield code="o">oai:zenodo.org:4741547</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="a">Dan Warren</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">danlwarren/ENMTools: ENMTools 1.0.4</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="a">Other (Open)</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;I forgot to create GitHub releases for versions 1.0.2 and 1.0.3, but I'm going to try to be good about it from now on.  Here are the intervening changes:&lt;/p&gt;
ENMTools 1.0.4
Bug Fixes
&lt;ul&gt;
&lt;li&gt;Raes and ter Steege-style tests were returning incorrect evaluate objects, although plots and p values were correct&lt;/li&gt;
&lt;li&gt;test.prop = "block" wasn't working correctly&lt;/li&gt;
&lt;/ul&gt;
Enhancements
&lt;ul&gt;
&lt;li&gt;Suppressing maxent startup messages by default&lt;/li&gt;
&lt;li&gt;Added support for bias layers to modeling functions&lt;/li&gt;
&lt;li&gt;Added check.env function to homogenize raster stacks so NAs propagate across layers&lt;/li&gt;
&lt;/ul&gt;
ENMTools 1.0.3
Enhancements
&lt;ul&gt;
&lt;li&gt;Brought up to date for new &lt;strong&gt;spatstat&lt;/strong&gt; changes&lt;/li&gt;
&lt;li&gt;Removed &lt;strong&gt;ppmlasso&lt;/strong&gt; until it is brought back on CRAN&lt;/li&gt;
&lt;/ul&gt;
ENMTools 1.0.2
Enhancements
&lt;ul&gt;
&lt;li&gt;Added a new general-purpose function for making background layers from point data.  It can do both circular buffers and buffered convex hulls, and can return points, a polygon, or a raster.  Converted the existing background buffer functions to just call this one, and will eventually deprecate the single-application functions.&lt;/li&gt;
&lt;li&gt;Added ability to select which corner you want for "block" validation.&lt;/li&gt;
&lt;li&gt;Added a function called &lt;em&gt;multi.variogram&lt;/em&gt; which takes a raster stack, builds a variogram for each layer, and then plots the gamma for each variable as a function of distance, scaled by the maximum gama for that variable.  This allows users to get some idea of the level of spatial autocorrelation in each predictor variable.&lt;/li&gt;
&lt;/ul&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">url</subfield>
    <subfield code="i">isSupplementTo</subfield>
    <subfield code="a">https://github.com/danlwarren/ENMTools/tree/1.0.4</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="a">10.5281/zenodo.3268813</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.4741547</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">software</subfield>
  </datafield>
</record>
807
214
views
downloads
All versions This version
Views 807156
Downloads 21442
Data volume 1.7 GB309.4 MB
Unique views 717143
Unique downloads 17636

Share

Cite as