There is a newer version of this record available.

Dataset Open Access

In silico voltage-sensitive dye imaging reveals the emergent dynamics of cortical populations: figure data & analysis code

Newton, Taylor; Reimann, Michael; Abdellah, Marwan; Chevtchenko, Grigori; Muller, Eilif B.; Markram, Henry

DCAT Export

<?xml version='1.0' encoding='utf-8'?>
<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#">
  <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.4718325">
    <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/>
    <dct:type rdf:resource="http://purl.org/dc/dcmitype/Dataset"/>
    <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.4718325</dct:identifier>
    <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
    <dct:creator>
      <rdf:Description rdf:about="http://orcid.org/0000-0001-8429-8702">
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string">0000-0001-8429-8702</dct:identifier>
        <foaf:name>Newton, Taylor</foaf:name>
        <foaf:givenName>Taylor</foaf:givenName>
        <foaf:familyName>Newton</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Foundation for Research on Information Technologies in Society (IT'IS)</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Reimann, Michael</foaf:name>
        <foaf:givenName>Michael</foaf:givenName>
        <foaf:familyName>Reimann</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Blue Brain Project</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Abdellah, Marwan</foaf:name>
        <foaf:givenName>Marwan</foaf:givenName>
        <foaf:familyName>Abdellah</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Blue Brain Project</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Chevtchenko, Grigori</foaf:name>
        <foaf:givenName>Grigori</foaf:givenName>
        <foaf:familyName>Chevtchenko</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Blue Brain Project</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Muller, Eilif B.</foaf:name>
        <foaf:givenName>Eilif B.</foaf:givenName>
        <foaf:familyName>Muller</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Mila - Quebec AI Institute</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:creator>
      <rdf:Description>
        <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
        <foaf:name>Markram, Henry</foaf:name>
        <foaf:givenName>Henry</foaf:givenName>
        <foaf:familyName>Markram</foaf:familyName>
        <org:memberOf>
          <foaf:Organization>
            <foaf:name>Blue Brain Project</foaf:name>
          </foaf:Organization>
        </org:memberOf>
      </rdf:Description>
    </dct:creator>
    <dct:title>In silico voltage-sensitive dye imaging reveals the emergent dynamics of cortical populations: figure data &amp; analysis code</dct:title>
    <dct:publisher>
      <foaf:Agent>
        <foaf:name>Zenodo</foaf:name>
      </foaf:Agent>
    </dct:publisher>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2021</dct:issued>
    <dcat:keyword>in silico modeling, voltage-sensitive dyes, mesoscale imaging, spatiotemporal dynamics, 22 spatial resolution</dcat:keyword>
    <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2021-03-28</dct:issued>
    <owl:sameAs rdf:resource="https://zenodo.org/record/4718325"/>
    <adms:identifier>
      <adms:Identifier>
        <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/4718325</skos:notation>
        <adms:schemeAgency>url</adms:schemeAgency>
      </adms:Identifier>
    </adms:identifier>
    <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.4642360"/>
    <dct:isPartOf rdf:resource="https://zenodo.org/communities/bluebrain"/>
    <dct:description>&lt;p&gt;Tabular data and analysis code corresponding to figures 2 through 5 (and supplementary figures 1 through 6) in the 2021 Nature Communcations publication entitled &amp;quot;In silico voltage-sensitive dye imaging reveals the emergent dynamics of cortical populations&amp;quot;. Tabular data are provided for each figure in the form of excel spreadsheets, with&amp;nbsp;individual&amp;nbsp;data sheets for each figure sub-panel, where&amp;nbsp;all axis and units are described in the row and column headings. Additionally, the ipython notebooks used to generate the figure data are provided (figure*.ipynb), together with the necessary raw data files (data.zip), supporting libraries (utils.zip), output folder (figures.zip), and requirements (requirements.txt). See README.rtf for detailed information and usage instructions.&amp;nbsp;&amp;nbsp;&lt;/p&gt;</dct:description>
    <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/>
    <dct:accessRights>
      <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess">
        <rdfs:label>Open Access</rdfs:label>
      </dct:RightsStatement>
    </dct:accessRights>
    <dcat:distribution>
      <dcat:Distribution>
        <dct:license rdf:resource="https://creativecommons.org/licenses/by/4.0/legalcode"/>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>14686040288</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/data.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>1399468</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/figures.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>4198</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/README.rtf"/>
        <dcat:mediaType>application/rtf</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>1625</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/requirements.txt"/>
        <dcat:mediaType>text/plain</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>581095</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/scripts.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>99158177</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/SourceData.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
    <dcat:distribution>
      <dcat:Distribution>
        <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.4718325"/>
        <dcat:byteSize>6096</dcat:byteSize>
        <dcat:downloadURL rdf:resource="https://zenodo.org/record/4718325/files/utils.zip"/>
        <dcat:mediaType>application/zip</dcat:mediaType>
      </dcat:Distribution>
    </dcat:distribution>
  </rdf:Description>
</rdf:RDF>
148
73
views
downloads
All versions This version
Views 1489
Downloads 7310
Data volume 102.3 GB14.8 GB
Unique views 1157
Unique downloads 254
More info on how stats are collected.
Indexed in
Publication date:
March 28, 2021
DOI:
10.5281/zenodo.4718325

Zenodo DOI Badge

DOI 

10.5281/zenodo.4718325

Markdown 

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.4718325.svg)](https://doi.org/10.5281/zenodo.4718325)

reStructedText 

.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.4718325.svg
   :target: https://doi.org/10.5281/zenodo.4718325

HTML 

<a href="https://doi.org/10.5281/zenodo.4718325"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.4718325.svg" alt="DOI"></a>

Image URL 

https://zenodo.org/badge/DOI/10.5281/zenodo.4718325.svg

Target URL 

https://doi.org/10.5281/zenodo.4718325

Keyword(s):
in silico modeling, voltage-sensitive dyes, mesoscale imaging, spatiotemporal dynamics, 22 spatial resolution
Published in:
Nature Communications:.
Communities:
License (for files):
Creative Commons Attribution 4.0 International

Versions

Version 6 10.5281/zenodo.4733519 Mar 28, 2021
Version 5 10.5281/zenodo.4718325 Mar 28, 2021
Version 4 10.5281/zenodo.4717732 Mar 28, 2021
Version 3 10.5281/zenodo.4707714 Mar 28, 2021
Version 2 10.5281/zenodo.4650288 Mar 28, 2021
View all 6 versions
Cite all versions? You can cite all versions by using the DOI 10.5281/zenodo.4642360. This DOI represents all versions, and will always resolve to the latest one. Read more.

Share

Cite as

Export