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ATLAS Deliverable 8.3: ATLAS research outputs

Pesant, S; Gafeira, J; Collart, T; Larkin, K

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    <subfield code="a">&lt;p&gt;Since 2016, ATLAS has published a total of 612 research outputs, and an additional 96 are currently in&lt;br&gt;
preparation. They consist of peer‐reviewed scientific articles (15%), data sets (16%), data products&lt;br&gt;
such as georeferenced maps (29%), and various &amp;ldquo;other&amp;rdquo; outputs (40%) that include project&lt;br&gt;
deliverables, cruise reports, presentations and posters (Figure 1). The latter are available at Zenodo1,&lt;br&gt;
whereas scientific articles were published in peer‐reviewed journals. A csv file listing of the current&lt;br&gt;
peer‐reviewed articles is attached to the present report. The proportion of research outputs belonging&lt;br&gt;
to these four types is consistent with the research life cycle of a scientific consortium, where ideas are&lt;br&gt;
communicated and developed among peers through presentations and progress reports, leading to a&lt;br&gt;
relatively smaller number of articles that contribute to the wider scientific community. Also consistent&lt;br&gt;
with the life cycle of scientific knowledge, data sets and data products were published towards the&lt;br&gt;
end of the project, leading to data re‐use and increased scientific impact beyond the life‐time of the&lt;br&gt;
project. Together, data sets and products dominate the overall number of research outputs (45%).&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Data sets ‐ ATLAS published a total of 106 data sets since 2016, and an additional 10 are currently in&lt;br&gt;
preparation. They were deposited in trusted archives and are currently available either in open access&lt;br&gt;
(69%), restricted access (16%) while under review, or under embargo (7%) for a period of 1‐2 years&lt;br&gt;
(Figure 2). In the present report, we characterised data sets according to their data type, main research&lt;br&gt;
topic, parameters, methods, geographic region and access mode. Table 1 provides an overview of the&lt;br&gt;
different data types and research topics addressed by ATLAS data sets. Observations relevant for the&lt;br&gt;
study of biodiversity, biogeography, palaeoceanography and environmental conditions clearly&lt;br&gt;
dominate the portfolio, followed by observations related to human activity. A number of modelling&amp;nbsp;data sets were also published, particularly with regards to environmental conditions and paleoceanography. Data sets also&lt;br&gt;
provide expert assessments about habitat conservation, as well as experimental work&lt;br&gt;
on biological processes. Software code used to generate some data sets are also&lt;br&gt;
included in this overview. The complete inventory of ATLAS data sets is provided in Section 2, including the publication year,&lt;br&gt;
the name of the data repository and the URL pointing to each data set. The inventory is also available in a csv file&lt;br&gt;
attached to the present report.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Data products ‐ ATLAS published a total of 177 data products since 2016, and an additional 30 are&lt;br&gt;
currently in preparation. They are available in open access on the ATLAS GeoNode2. In the present&lt;br&gt;
report, we characterised data products according to their data type, main research topic, parameters,&lt;br&gt;
methods, geographic region and format. Table 2 provides an overview of the different data types,&lt;br&gt;
research topics and parameter types addressed by ATLAS data products. The portfolio is dominated&lt;br&gt;
by dynamic maps (raster of vector) of modelled habitat suitability at basin‐scale, and by static maps&lt;br&gt;
(images) of modelled deep‐sea benthic species larval dispersion and habitat connectivity at the scale&lt;br&gt;
of ATLAS case studies. Environmental maps resulting from physical, biogeochemical and&lt;br&gt;
geomorphological models also predominate. A number of maps based on geomorphological&lt;br&gt;
observations and expert assessments of conservation status and human activity are also available in&lt;br&gt;
various formats. The complete inventory of ATLAS data products is provided in Section 3, including&lt;br&gt;
the publication year, the access mode, the URL of each data products on the ATLAS GeoNode, and&lt;br&gt;
where applicable the URL pointing to the archive where the data product was published. The inventory&lt;br&gt;
is also available in a csv file attached to the present report.&amp;nbsp;&lt;/p&gt;</subfield>
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