Software Open Access
matthiaskoenig/sbmlsim: 0.1.14
Matthias König; YannickDuport
Release notes for sbmlsim 0.1.14
- Fix #81, feature timecourse concatenation and reuse in timecoursesim
This allows simplified creation of multiple dosing timecourse simulations and reuse
of timecourse definitions in multiple simulations. E.g. repeated timecourse [tc]*3
simulator = Simulator(MODEL_REPRESSILATOR)
tc = Timecourse(
start=0,
end=50,
steps=100,
changes={"X": 10})
s = simulator._timecourse(
simulation=TimecourseSim(
[tc]*3
)
)
- Fix #82, bugfix; remove time shift from discarded simulations
- Fix #83, allow empty timecourses in timecoursesim
- Fix #86, dependency update ray>=1.2.0
- Fix #87, weighting by counts in parameter fitting
- Fix #88, bugfix figure closing in parameter fitting
- adding mypy configuration and initial mypy fixes
- many flake8 fixes and type annotations
- Fix #91, support hex colors in plot
- Fix #94, update
xarray>=0.17.0
Files
(4.8 MB)
| Name | Size | |
|---|---|---|
|
matthiaskoenig/sbmlsim-0.1.14.zip
md5:c4f37e2ce841318c5b99b7f2a4b73b57 |
4.8 MB | Download |
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- Publication date:
- March 1, 2021
- DOI:
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- Related identifiers:
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- License (for files):
- Other (Open)