Contents of this repo

  • NC_045512.2_reference.fasta

    A sequence-identical copy of https://www.ncbi.nlm.nih.gov/nuccore/NC_045512.2?report=fasta

  • ARTIC_nCoV-2019_v3.bed

    ARTIC network primer scheme bed file

  • ARTIC_amplicon_info_v3.tsv

    A custom tabular file describing the amplicon grouping of the primers in the primer scheme file

  • NC_045512.2_feature_mapping.tsv

    A custom tabular file mapping NCBI RefSeq Protein identifiers as used by snpEff version 4.5covid19 to their commonly used names