Software Open Access
Daniel S. Himmelstein
<?xml version='1.0' encoding='UTF-8'?> <record xmlns="http://www.loc.gov/MARC21/slim"> <leader>00000nmm##2200000uu#4500</leader> <datafield tag="653" ind1=" " ind2=" "> <subfield code="a">Uberon</subfield> </datafield> <datafield tag="653" ind1=" " ind2=" "> <subfield code="a">Anatomical structures</subfield> </datafield> <datafield tag="653" ind1=" " ind2=" "> <subfield code="a">Homo sapiens</subfield> </datafield> <datafield tag="653" ind1=" " ind2=" "> <subfield code="a">Ontology</subfield> </datafield> <datafield tag="653" ind1=" " ind2=" "> <subfield code="a">Rephetio</subfield> </datafield> <controlfield tag="005">20200125072414.0</controlfield> <controlfield tag="001">45527</controlfield> <datafield tag="856" ind1="4" ind2=" "> <subfield code="s">5417010</subfield> <subfield code="z">md5:906daabab4a6b1b655671ca4474f15e2</subfield> <subfield code="u">https://zenodo.org/record/45527/files/uberon-v1.0.zip</subfield> </datafield> <datafield tag="542" ind1=" " ind2=" "> <subfield code="l">open</subfield> </datafield> <datafield tag="260" ind1=" " ind2=" "> <subfield code="c">2016-02-04</subfield> </datafield> <datafield tag="909" ind1="C" ind2="O"> <subfield code="p">software</subfield> <subfield code="o">oai:zenodo.org:45527</subfield> </datafield> <datafield tag="100" ind1=" " ind2=" "> <subfield code="a">Daniel S. Himmelstein</subfield> </datafield> <datafield tag="245" ind1=" " ind2=" "> <subfield code="a">User-friendly anatomical structures data from the Uberon Ontology v1.0</subfield> </datafield> <datafield tag="540" ind1=" " ind2=" "> <subfield code="a">Other (Open)</subfield> </datafield> <datafield tag="650" ind1="1" ind2="7"> <subfield code="a">cc-by</subfield> <subfield code="2">opendefinition.org</subfield> </datafield> <datafield tag="520" ind1=" " ind2=" "> <subfield code="a"><p>This repository creates user-friendly datasets from the 2015-07-24 Uberon release. Data is extracted from the OBO format and stored as tidy TSV files. For example, a tabular listing of cross-references is extracted. Additionally, a slim term set called Uberon hetio-slim is created containing 402 anatomical structures.</p></subfield> </datafield> <datafield tag="773" ind1=" " ind2=" "> <subfield code="n">url</subfield> <subfield code="i">isSupplementTo</subfield> <subfield code="a">https://github.com/dhimmel/uberon/tree/v1.0</subfield> </datafield> <datafield tag="024" ind1=" " ind2=" "> <subfield code="a">10.5281/zenodo.45527</subfield> <subfield code="2">doi</subfield> </datafield> <datafield tag="980" ind1=" " ind2=" "> <subfield code="a">software</subfield> </datafield> </record>
All versions | This version | |
---|---|---|
Views | 195 | 195 |
Downloads | 15 | 15 |
Data volume | 81.3 MB | 81.3 MB |
Unique views | 192 | 192 |
Unique downloads | 14 | 14 |