GMOD/Apollo: 2.5.3-RC1 Release Candidate 1

RELEASE CANDIDATE 1

2.6.3-RC1

Features

• Fix empty attribute list in annotation panel 2552.
• Added ability to use posts to sequence methods 2555.
• Added system info web service 2557.
• Add "merged from" comment to merged in transcript and gene 2567.
• Added support for "obsolete", and partials in the interface for GFF3s 2573.

Bug Fixes:

• Bad coordinate value in genomic element details screen in annotator panel 2559.
• Web services indicated user had no organism permissions when checking the login 2554.
• Vcf reads as ISO-8859-1 instead of UTF-8 from reader mangling some symbols. 2498.
• Added security fixes for web services. 2564

Infrastructure Changes

• Removed travis in favor of GitHub Actions 2546.

Full change long for all versions can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on quay.io and docker hub:

https://quay.io/repository/gmod/apollo?tab=builds https://hub.docker.com/r/gmod/apollo Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide upgrading existing Apollo installations here: https://genomearchitect.readthedocs.io/en/latest/Migration.html

Report issues if found. Active mailing list (apollo@lbl.gov) and google group.