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mulTree: v1.2

Thomas Guillerme; Kevin Healy

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  <dc:creator>Thomas Guillerme</dc:creator>
  <dc:creator>Kevin Healy</dc:creator>
2016/01/22  - v1.2

complete new architectural structure!
all the functions are now unit tested!
all manuals are now written in Roxygen2 format!
many functions arguments names have been modified, please check individual functions manual.

rTreeBind is renamed to tree.bind.
In as.mulTree, the argument species is now taxa.

mulTree output: when output chain name already exists in current directory, the function now asks if user wants to overwrite the existing files.
In read.mulTree, the argument mulTree.mcmc is now mulTree.chain.
In summary.mulTree, the argument mulTree.mcmc is now mulTree.results and the argument CI is now prob.

summary.mulTree now outputs a c("matrix", "mulTree") class object.
In plot.mulTree, the argument mulTree.mcmc must now be an object returned from summary.mulTree.

  <dc:title>mulTree: v1.2</dc:title>
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