Published November 24, 2020
| Version 1.4
Dataset
Open
Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object
Creators
- 1. Newcastle University
- 2. King's College London
- 3. Sanger Institute
Description
Dataset to accompany BioRxiv preprint "Poised cell circuits in human skin are activated in disease" (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (<200 genes and >20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.
Full dataset with annotation ("combined") in obs.
Notes
This has been updated - the previous version had multiple old annotations that are no longer in use,
Files
Files
(3.9 GB)
| Name | Size | Download all |
|---|---|---|
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md5:091e1b3703b6eb91c74142e33c79f533
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25.3 MB | Download |
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md5:0f76145e788f04e38750e5679c385b81
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3.9 GB | Download |