Dataset Open Access
Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object
Gary Reynolds;
Peter Vegh;
James Fletcher;
Elizabeth Poyner;
Muzlifah Haniffa;
Fiona Watt;
Sarah Teichmann
Dataset to accompany BioRxiv preprint "Poised cell circuits in human skin are activated in disease" (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (<200 genes and >20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.
Full dataset with annotation ("combined") in obs.
This has been updated - the previous version had multiple old annotations that are no longer in use,
Files
(3.9 GB)
| Name | Size | |
|---|---|---|
|
submission_210120.h5ad
md5:51f15a2733cddebdca0e71d5bbbe26e8 |
3.9 GB | Download |
1,175
565
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 1,175 | 50 |
| Downloads | 565 | 1 |
| Data volume | 5.6 TB | 3.9 GB |
| Unique views | 696 | 41 |
| Unique downloads | 376 | 1 |
Indexed in
- Publication date:
- November 24, 2020
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International