There is a newer version of this record available.

Dataset Open Access

Local Z Projector example dataset and parameters 02

Léo Valon; Jean-Yves Tinevez

Drosophila pupa notum, captured with a laser-scanning confocal microscope (LSM 880, Zeiss). Pixel size 0.188 µm, z step 1 µm.

This dataset  also contains the parameters to generate the reference surface and local projection. It is meant to be used with the Fiji plugin called 'LocalZProjector': https://gitlab.pasteur.fr/iah-public/localzprojector. The two *.localzprojector files can be loaded directly in the plugin to load adequate parameters.

See the accompanying paper: DProj: A toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images.

https://www.biorxiv.org/content/10.1101/2021.01.15.426809v2

 

Files (2.3 GB)
Name Size
2018_03_08_cad_cic_LSM-params-screenshot.png
md5:20264a081113390d2a7ed416153b165a
52.5 kB Download
2018_03_08_cad_cic_LSM.extractsurface.localzprojector
md5:06c4957440e9838660967f18d0be9d60
554 Bytes Download
2018_03_08_cad_cic_LSM.referencesurface.localzprojector
md5:06b98d5bca6f6460bcbdb01e0c4d2e97
419 Bytes Download
2018_03_08_cad_cic_LSM.tif
md5:8cd3ad66289ce2afa4ce898b9ef18a0a
2.3 GB Download
59
37
views
downloads
All versions This version
Views 5944
Downloads 3726
Data volume 32.8 GB27.8 GB
Unique views 5240
Unique downloads 1912

Share

Cite as