Dataset Open Access

CORD-19 Diachronic Concept Embeddings

Newman-Griffis, Denis; Sivaraman, Venkatesh; Fosler-Lussier, Eric; Perer, Adam; Hochheiser, Harry


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <datafield tag="041" ind1=" " ind2=" ">
    <subfield code="a">eng</subfield>
  </datafield>
  <controlfield tag="005">20210214122719.0</controlfield>
  <controlfield tag="001">4432958</controlfield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Carnegie Mellon University</subfield>
    <subfield code="a">Sivaraman, Venkatesh</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">The Ohio State University</subfield>
    <subfield code="a">Fosler-Lussier, Eric</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Carnegie Mellon University</subfield>
    <subfield code="a">Perer, Adam</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">University of Pittsburgh</subfield>
    <subfield code="a">Hochheiser, Harry</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">340307968</subfield>
    <subfield code="z">md5:5bc7c50f6bfd89c1c33d34d394556c92</subfield>
    <subfield code="u">https://zenodo.org/record/4432958/files/CORD-19_analysis__2020-03__2020-10.db</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">998468624</subfield>
    <subfield code="z">md5:be0737c6c04a9e51fc04e94f384dc1f9</subfield>
    <subfield code="u">https://zenodo.org/record/4432958/files/CORD-19_monthly_embeddings.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2021-02-14</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">openaire_data</subfield>
    <subfield code="p">user-covid-19</subfield>
    <subfield code="p">user-zenodo</subfield>
    <subfield code="o">oai:zenodo.org:4432958</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="u">University of Pittsburgh</subfield>
    <subfield code="0">(orcid)0000-0002-0473-4226</subfield>
    <subfield code="a">Newman-Griffis, Denis</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">CORD-19 Diachronic Concept Embeddings</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-covid-19</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-zenodo</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://creativecommons.org/licenses/by/4.0/legalcode</subfield>
    <subfield code="a">Creative Commons Attribution 4.0 International</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;Medical concept embeddings trained on monthly releases of the &lt;a href="https://zenodo.org/record/3731937"&gt;CORD-19 dataset&lt;/a&gt;, for analysis of diachronic change.&lt;/p&gt;

&lt;p&gt;This resource includes:&lt;/p&gt;

&lt;ol&gt;
	&lt;li&gt;Concept embeddings, trained using the &lt;a href="https://github.com/OSU-slatelab/JET"&gt;JET&lt;/a&gt; toolkit on the set of articles added to CORD-19 in each month of March 2020 - October 2020.&amp;nbsp; Concepts are SNOMED CT codes.&lt;/li&gt;
	&lt;li&gt;Nearest neighborhood-based analysis results of the concept embeddings, stored as a SQLite database.&lt;/li&gt;
&lt;/ol&gt;

&lt;p&gt;Database content excludes terms and definitions for&amp;nbsp;SNOMED CT codes, which are licensed content owned by SNOMED International. Information on accessing SNOMED licensed content may be found &lt;a href="https://www.nlm.nih.gov/healthit/snomedct/international.html"&gt;here&lt;/a&gt;.&lt;/p&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">references</subfield>
    <subfield code="a">10.18653/v1/W18-3026</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="a">10.5281/zenodo.3738457</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.4432958</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">dataset</subfield>
  </datafield>
</record>
4,893
358
views
downloads
All versions This version
Views 4,8932,129
Downloads 358102
Data volume 57.1 GB46.6 GB
Unique views 4,5472,024
Unique downloads 27985

Share

Cite as