Dataset Open Access

CORD-19 Diachronic Concept Embeddings

Newman-Griffis, Denis; Sivaraman, Venkatesh; Fosler-Lussier, Eric; Perer, Adam; Hochheiser, Harry


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{
  "inLanguage": {
    "alternateName": "eng", 
    "@type": "Language", 
    "name": "English"
  }, 
  "description": "<p>Medical concept embeddings trained on monthly releases of the <a href=\"https://zenodo.org/record/3731937\">CORD-19 dataset</a>, for analysis of diachronic change.</p>\n\n<p>This resource includes:</p>\n\n<ol>\n\t<li>Concept embeddings, trained using the <a href=\"https://github.com/OSU-slatelab/JET\">JET</a> toolkit on the set of articles added to CORD-19 in each month of March 2020 - October 2020.&nbsp; Concepts are SNOMED CT codes.</li>\n\t<li>Nearest neighborhood-based analysis results of the concept embeddings, stored as a SQLite database.</li>\n</ol>\n\n<p>Database content excludes terms and definitions for&nbsp;SNOMED CT codes, which are licensed content owned by SNOMED International. Information on accessing SNOMED licensed content may be found <a href=\"https://www.nlm.nih.gov/healthit/snomedct/international.html\">here</a>.</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "University of Pittsburgh", 
      "@id": "https://orcid.org/0000-0002-0473-4226", 
      "@type": "Person", 
      "name": "Newman-Griffis, Denis"
    }, 
    {
      "affiliation": "Carnegie Mellon University", 
      "@type": "Person", 
      "name": "Sivaraman, Venkatesh"
    }, 
    {
      "affiliation": "The Ohio State University", 
      "@type": "Person", 
      "name": "Fosler-Lussier, Eric"
    }, 
    {
      "affiliation": "Carnegie Mellon University", 
      "@type": "Person", 
      "name": "Perer, Adam"
    }, 
    {
      "affiliation": "University of Pittsburgh", 
      "@type": "Person", 
      "name": "Hochheiser, Harry"
    }
  ], 
  "url": "https://zenodo.org/record/4432958", 
  "citation": [
    {
      "@id": "https://doi.org/10.18653/v1/W18-3026", 
      "@type": "CreativeWork"
    }
  ], 
  "datePublished": "2021-02-14", 
  "version": "3.0", 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/99356aca-0c35-479e-b814-ee703983d1cd/CORD-19_analysis__2020-03__2020-10.db", 
      "encodingFormat": "db", 
      "@type": "DataDownload"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/99356aca-0c35-479e-b814-ee703983d1cd/CORD-19_monthly_embeddings.zip", 
      "encodingFormat": "zip", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.4432958", 
  "@id": "https://doi.org/10.5281/zenodo.4432958", 
  "@type": "Dataset", 
  "name": "CORD-19 Diachronic Concept Embeddings"
}
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