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Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object

Gary Reynolds; Peter Vegh; James Fletcher; Elizabeth Poyner; Muzlifah Haniffa; Fiona Watt; Sarah Teichmann


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  <dc:creator>Gary Reynolds</dc:creator>
  <dc:creator>Peter Vegh</dc:creator>
  <dc:creator>James Fletcher</dc:creator>
  <dc:creator>Elizabeth Poyner</dc:creator>
  <dc:creator>Muzlifah Haniffa</dc:creator>
  <dc:creator>Fiona Watt</dc:creator>
  <dc:creator>Sarah Teichmann</dc:creator>
  <dc:date>2020-11-24</dc:date>
  <dc:description>Dataset to accompany BioRxiv preprint "Poised cell circuits in human skin are activated in disease" (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (&lt;200 genes and &gt;20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.

Full dataset with annotation ("full_clustering") in obs.</dc:description>
  <dc:description>This has been updated - the previous version had multiple old annotations that are no longer in use,</dc:description>
  <dc:identifier>https://zenodo.org/record/4310074</dc:identifier>
  <dc:identifier>10.5281/zenodo.4310074</dc:identifier>
  <dc:identifier>oai:zenodo.org:4310074</dc:identifier>
  <dc:relation>doi:10.5281/zenodo.4288748</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:title>Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
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