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Dataset Open Access

Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object

Gary Reynolds; Peter Vegh; James Fletcher; Elizabeth Poyner; Muzlifah Haniffa; Fiona Watt; Sarah Teichmann


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{
  "description": "<p>Dataset to accompany BioRxiv preprint &quot;Poised cell circuits in human skin are activated in disease&quot; (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (&lt;200 genes and &gt;20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.</p>\n\n<p>Full dataset with annotation (&quot;full_clustering&quot;) in obs.</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "Newcastle University", 
      "@id": "https://orcid.org/0000-0002-8142-8708", 
      "@type": "Person", 
      "name": "Gary Reynolds"
    }, 
    {
      "affiliation": "Newcastle University", 
      "@id": "https://orcid.org/0000-0002-0133-3240", 
      "@type": "Person", 
      "name": "Peter Vegh"
    }, 
    {
      "affiliation": "Newcastle University", 
      "@id": "https://orcid.org/0000-0001-9610-1858", 
      "@type": "Person", 
      "name": "James Fletcher"
    }, 
    {
      "affiliation": "Newcastle University", 
      "@id": "https://orcid.org/0000-0002-0443-9980", 
      "@type": "Person", 
      "name": "Elizabeth Poyner"
    }, 
    {
      "affiliation": "Newcastle University", 
      "@id": "https://orcid.org/0000-0002-3927-2084", 
      "@type": "Person", 
      "name": "Muzlifah Haniffa"
    }, 
    {
      "affiliation": "King's College London", 
      "@id": "https://orcid.org/0000-0001-9151-5154", 
      "@type": "Person", 
      "name": "Fiona Watt"
    }, 
    {
      "affiliation": "Sanger Institute", 
      "@id": "https://orcid.org/0000-0002-6294-6366", 
      "@type": "Person", 
      "name": "Sarah Teichmann"
    }
  ], 
  "url": "https://zenodo.org/record/4310074", 
  "datePublished": "2020-11-24", 
  "version": "1.1", 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/eed4d36d-923f-4aea-9ae5-3e4c67365d50/submission.h5ad", 
      "encodingFormat": "h5ad", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.4310074", 
  "@id": "https://doi.org/10.5281/zenodo.4310074", 
  "@type": "Dataset", 
  "name": "Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object"
}
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