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Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object

Gary Reynolds; Peter Vegh; James Fletcher; Elizabeth Poyner; Muzlifah Haniffa; Fiona Watt; Sarah Teichmann


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  <identifier identifierType="DOI">10.5281/zenodo.4310074</identifier>
  <creators>
    <creator>
      <creatorName>Gary Reynolds</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-8142-8708</nameIdentifier>
      <affiliation>Newcastle University</affiliation>
    </creator>
    <creator>
      <creatorName>Peter Vegh</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-0133-3240</nameIdentifier>
      <affiliation>Newcastle University</affiliation>
    </creator>
    <creator>
      <creatorName>James Fletcher</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-9610-1858</nameIdentifier>
      <affiliation>Newcastle University</affiliation>
    </creator>
    <creator>
      <creatorName>Elizabeth Poyner</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-0443-9980</nameIdentifier>
      <affiliation>Newcastle University</affiliation>
    </creator>
    <creator>
      <creatorName>Muzlifah Haniffa</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-3927-2084</nameIdentifier>
      <affiliation>Newcastle University</affiliation>
    </creator>
    <creator>
      <creatorName>Fiona Watt</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-9151-5154</nameIdentifier>
      <affiliation>King's College London</affiliation>
    </creator>
    <creator>
      <creatorName>Sarah Teichmann</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-6294-6366</nameIdentifier>
      <affiliation>Sanger Institute</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <dates>
    <date dateType="Issued">2020-11-24</date>
  </dates>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/4310074</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.4288748</relatedIdentifier>
  </relatedIdentifiers>
  <version>1.1</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Dataset to accompany BioRxiv preprint &amp;quot;Poised cell circuits in human skin are activated in disease&amp;quot; (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (&amp;lt;200 genes and &amp;gt;20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.&lt;/p&gt;

&lt;p&gt;Full dataset with annotation (&amp;quot;full_clustering&amp;quot;) in obs.&lt;/p&gt;</description>
    <description descriptionType="Other">This has been updated - the previous version had multiple old annotations that are no longer in use,</description>
  </descriptions>
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