Dataset Open Access
Data for Developmental cell programs are co-opted in inflammatory skin disease - filtered, annotated anndata object
Gary Reynolds;
Peter Vegh;
James Fletcher;
Elizabeth Poyner;
Muzlifah Haniffa;
Fiona Watt;
Sarah Teichmann
Dataset to accompany BioRxiv preprint "Poised cell circuits in human skin are activated in disease" (https://www.biorxiv.org/content/10.1101/2020.11.05.369363v1). Data in AnnData (h5ad) format. Preprocessed to exclude doublets and low quality cells (<200 genes and >20% mitochondrial content). Includes neighborhood graph and UMAP coordinates and annotation from the manuscript in metadata.
Full dataset with annotation ("full_clustering") in obs.
This has been updated - the previous version had multiple old annotations that are no longer in use,
Files
(13.2 GB)
| Name | Size | |
|---|---|---|
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submission.h5ad
md5:42a861770b789b106c914b549cdd2a5b |
13.2 GB | Download |
2,146
983
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 2,146 | 1,027 |
| Downloads | 983 | 559 |
| Data volume | 8.6 TB | 7.4 TB |
| Unique views | 1,302 | 876 |
| Unique downloads | 647 | 422 |
Indexed in
- Publication date:
- November 24, 2020
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International