Preprint Open Access

An interactive DNA barcode browser

Roderic D. M. Page


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  <dc:creator>Roderic D. M. Page</dc:creator>
  <dc:date>2020-11-10</dc:date>
  <dc:description>This paper describes an interactive web application to display DNA barcode data. It supports both query by sequence and query by geographic area. By using n-gram indexing of DNA sequences, and alignment-free phylogeny construction, the user can interactively explore DNA barcode data in real time.</dc:description>
  <dc:identifier>https://zenodo.org/record/4266482</dc:identifier>
  <dc:identifier>10.5281/zenodo.4266482</dc:identifier>
  <dc:identifier>oai:zenodo.org:4266482</dc:identifier>
  <dc:relation>url:https://dna-barcode-browser.herokuapp.com</dc:relation>
  <dc:relation>url:https://github.com/rdmpage/dna-barcode-browser</dc:relation>
  <dc:relation>doi:10.5281/zenodo.4266481</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:subject>DNA barcoding</dc:subject>
  <dc:subject>visualisation</dc:subject>
  <dc:subject>k-mer</dc:subject>
  <dc:subject>elasticsearch</dc:subject>
  <dc:subject>phylogeny</dc:subject>
  <dc:title>An interactive DNA barcode browser</dc:title>
  <dc:type>info:eu-repo/semantics/preprint</dc:type>
  <dc:type>publication-preprint</dc:type>
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