Dataset Open Access

EMUE-D5-3-EPTTissueCharacterization

A. Arduino; F. Pennecchi; L. Zilberti; U. Katscher; M. G. Cox


Dublin Core Export

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<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:creator>A. Arduino</dc:creator>
  <dc:creator>F. Pennecchi</dc:creator>
  <dc:creator>L. Zilberti</dc:creator>
  <dc:creator>U. Katscher</dc:creator>
  <dc:creator>M. G. Cox</dc:creator>
  <dc:date>2020-11-06</dc:date>
  <dc:description>Magnetic resonance-based electric properties tomography

The example shows the uncertainty evaluation, under repeatability conditions, of a technique for Electric Properties Tomography (EPT), a quantitative imaging method based on Magnetic Resonance Imaging (MRI). Repeated acquisitions of MRI scans of a homogeneous cylindrical phantom are analysed with appropriate statistical techniques to evaluate the variance-covariance matrix of the EPT input. The latter is then propagated through the EPT technique according to the law of propagation of the uncertainty as described in the GUM [Activity A2.3.2].

Files contained in the dataset are:


	ReadMe: text file describing the EMUE-D5-3-EPTTissueCharacterization dataset
	A232_Report.pdf: Report “Magnetic resonance-based electric properties tomography”
	A232_Report.tex: LaTeX file to be compiled in order to produce A232_Report.pdf
	CompendiumA232.bib: bibliography file
	kernel-shapes.png: plot in figure 1 of A232_Report.pdf
	acquired-maps.png: plot in figure 2 of A232_Report.pdf
	input-cov-pixel.png: plot in figure 3 of A232_Report.pdf
	output-cov.png: plot in figure 4 of A232_Report.pdf
	output-distr.png: plot in figure 5 of A232_Report.pdf
	code: directory containing the computational codes for the EPT software (C++) and post-processing (matlab)
	code/averages.m: matlab code that computes the averages, the weighted averages and the corresponding uncertainties
	code/CMakeLists.txt: cmake project for building the EPT software
	code/main.cc: C++ source file of the EPT software
	code/main.h: C++ header file of the EPT software
	data: directory containing the input and the output data of the EPT software
	data/emue-[0-2]-[1-5].toml: input configuration files for the EPT software
	data/emue-sphere.h5: input dataset of scans for the EPT software
	data/emue-sphere-scov.h5: input dataset of variance-covariance matrix computed with shrinkage estimation for the EPT software
	data/emue-[0-2]-[1-5].log: output log files of the EPT software
	data/emue-[0-2]-[1-5]-output.h5: output dataset files of the EPT software
</dc:description>
  <dc:description>The example relies on the implementation of phase-based Helmholtz EPT collected in the open-source C++ library EPTlib 0.1.1 (https://eptlib.github.io/), developed in the framework of the EMPIR Project 18HLT05 QUIERO (https://quiero-project.eu/).</dc:description>
  <dc:identifier>https://zenodo.org/record/4248879</dc:identifier>
  <dc:identifier>10.5281/zenodo.4248879</dc:identifier>
  <dc:identifier>oai:zenodo.org:4248879</dc:identifier>
  <dc:relation>doi:10.5281/zenodo.4248878</dc:relation>
  <dc:relation>url:https://zenodo.org/communities/emue</dc:relation>
  <dc:relation>url:https://zenodo.org/communities/inrim</dc:relation>
  <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by/4.0/legalcode</dc:rights>
  <dc:subject>Electric Properties Tomography; Magnetic Resonance Imaging; Variance-covariance matrix; Shrinkage estimation; Law of propagation of uncertainty</dc:subject>
  <dc:title>EMUE-D5-3-EPTTissueCharacterization</dc:title>
  <dc:type>info:eu-repo/semantics/other</dc:type>
  <dc:type>dataset</dc:type>
</oai_dc:dc>
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