4173596
doi
10.5281/zenodo.4173596
oai:zenodo.org:4173596
user-msda
Pretrained Spec2Vec model (trained on GNPS AllPositive dataset)
Huber, Florian
Netherlands eScience Center
info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
Spec2Vec model, mass spectra embeddings, Gensim word2vec model
<p>Pretrained Gensim Word2Vec model for Spec2Vec:</p>
<p>The model was trained for 15 iterations on the "AllPositive" dataset, created from GNPS positive ionmode mass spectra (95320 spectra after filtering) as fully described here https://github.com/iomega/spec2vec_gnps_data_analysis/blob/master/notebooks/iomega-5b-train-spec2vec-model-all-gnps.ipynb. </p>
<p>Updated version v2:</p>
<p>The former model was difficult to import using the current version of the spec2vec code. This is hence an re-trained model on the same dataset as before. Since the model initiation is inherently randomized, this model will not produce the exact same word vectors (peak vectors).</p>
Zenodo
2020-08-10
info:eu-repo/semantics/other
3978069
user-msda
v2
1604258415.059256
139092128
md5:d76f16fd8096645b2de67f1ad43fef34
https://zenodo.org/records/4173596/files/spec2vec_AllPositive_ratio05_filtered_201101_iter_15.model.wv.vectors.npy
7864010
md5:52fc267f5ce219f66cae5d4feb31a146
https://zenodo.org/records/4173596/files/spec2vec_AllPositive_ratio05_filtered_201101_iter_15.model
139092128
md5:18d2cf589bf53cd1d9a5332575bde830
https://zenodo.org/records/4173596/files/spec2vec_AllPositive_ratio05_filtered_201101_iter_15.model.trainables.syn1neg.npy
public
10.5281/zenodo.3978069
isVersionOf
doi