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UniBind 2.0 - LOLA databases for the robust and permissive collections

Rafael Riudavets Puig; Paul Boddie; Aziz Khan; Jaime Abraham Castro Mondragón; Anthony Mathelier


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  <identifier identifierType="DOI">10.5281/zenodo.4161028</identifier>
  <creators>
    <creator>
      <creatorName>Rafael Riudavets Puig</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-2855-9952</nameIdentifier>
      <affiliation>University of Oslo</affiliation>
    </creator>
    <creator>
      <creatorName>Paul Boddie</creatorName>
      <affiliation>University of Oslo</affiliation>
    </creator>
    <creator>
      <creatorName>Aziz Khan</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-6459-6224</nameIdentifier>
      <affiliation>Stanford Cancer Institute</affiliation>
    </creator>
    <creator>
      <creatorName>Jaime Abraham Castro Mondragón</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-4069-357X</nameIdentifier>
      <affiliation>University of Oslo</affiliation>
    </creator>
    <creator>
      <creatorName>Anthony Mathelier</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-5127-5459</nameIdentifier>
      <affiliation>University of Oslo</affiliation>
    </creator>
  </creators>
  <titles>
    <title>UniBind 2.0 - LOLA databases for the robust and permissive collections</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <dates>
    <date dateType="Issued">2020-11-02</date>
  </dates>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/4161028</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.4161027</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This repository contains all LOLA databases used in the &lt;a href="https://unibind.uio.no/enrichment/"&gt;UniBind 2.0 enrichment tool&lt;/a&gt;. For each organism, we provide the LOLA databases for all TFBS sets and the complete universe of TFBSs contained in the robust and permissive collections. The databases are provided as .RDS R objects, which can be directly loaded into R or used as inputs for the &lt;a href="https://bitbucket.org/CBGR/unibind_enrichment/"&gt;command-line UniBind enrichment tool&lt;/a&gt;.&lt;/p&gt;</description>
  </descriptions>
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