4147100
doi
10.5281/zenodo.4147100
oai:zenodo.org:4147100
Hoff, Jesse L
Gencove, Inc
Li, Jeremiah H
Gencove, Inc
Kuehn, Larry A
USDA-ARS-USMARC
Keel, Brittney N
USDA-ARS-USMARC
Lindholm-Perry, Amanda K
USDA-ARS-USMARC
Pickrell, Joseph K
Gencove, Inc
Data from: Assessment of imputation from low-pass sequencing to predict merit of beef steers
Snelling, Warren M
USDA-ARS-USMARC
info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
sequence
imputation
genomic prediction
beef cattle
<p>Sup1.tsv: Tab separated text list of animals in imputation reference, containing ID, SRR Accessions, Source, Breed and number of downsampled progeny examined in this study.</p>
<p>Sup2.vcf.gz: VCF-formatted text containing snpEff annotation of variants imputed from low-pass sequence.</p>
<p>Sup3.tsv: Tab separated text summarizing number of variants, low-confidence variants and variant spacing in 1 Mb intervals. </p>
<p>Sup4.tsv: Tab separated text with correlations between molecular breeding values with SNP effects applied to genotypes imputed from low-pass sequence or SNP arrays.</p>
<p>steerworkflow.pdf: Diagram depicting processes to obtain imputed genotypes, (G)EBV and MBV of the study steers</p>
Zenodo
2020-09-28
info:eu-repo/semantics/article
4057083
1603931214.207616
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https://zenodo.org/records/4147100/files/Sup3.tsv
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https://zenodo.org/records/4147100/files/Sup4.tsv
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https://zenodo.org/records/4147100/files/Sup2.vcf.gz
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https://zenodo.org/records/4147100/files/Sup1.tsv
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https://zenodo.org/records/4147100/files/steerworkflow.pdf
public
10.5281/zenodo.4057083
isVersionOf
doi
Genes
2020-09-28