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Published September 28, 2020 | Version v3.3.10
Software Open

Nesvilab/philosopher: Philosopher 3.3.10

Creators

  • 1. University of Michigan

Description

Added

  • A new Workspace option allows the use of a custom folder as a temporary folder.
  • The Database now supports multiple database IDs (separate them with a comma).
  • Support for the latest msconvert mzML format.
  • Output prefix flag added to PTMProphet.
Changed
  • The parameter file was updated, and the terms were made more human-readable.
  • The code compilation is now done with GO v1.15.
  • PTMProphet updated to v6.0
  • The Abacus memory footprint as significantly reduced.
Fixed
  • Small bugs and fixes.
  • PSMs lists often contained observations mapping to proteins that did not pass the FDR filter.
  • Bio quant was failing because of the unassigned database path.
  • Some annotation files were being ignored.
  • Added FASTA database file extension back again.
Snapcraft
  • snap install philosopher
Docker images
  • docker pull prvst/philosopher:3.3.10
  • docker pull prvst/philosopher:latest

Files

Nesvilab/philosopher-v3.3.10.zip

Files (156.5 MB)

Name Size Download all
md5:511adc30d56c5fba00c3edbf6b3bec74
156.5 MB Preview Download

Additional details

Related works

Is supplement to
https://github.com/Nesvilab/philosopher/tree/v3.3.10 (URL)