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danlwarren/ENMTools: ENMTools 1.0.1

Dan Warren; Russell Dinnage; Nicholas J. Matzke; Nicholas Huron; John Baumgartner

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<oai_dc:dc xmlns:dc="" xmlns:oai_dc="" xmlns:xsi="" xsi:schemaLocation="">
  <dc:creator>Dan Warren</dc:creator>
  <dc:creator>Russell Dinnage</dc:creator>
  <dc:creator>Nicholas J. Matzke</dc:creator>
  <dc:creator>Nicholas Huron</dc:creator>
  <dc:creator>John Baumgartner</dc:creator>
  <dc:description>This is the first post-CRAN update to ENMTools, which fixes a few minor issues and adds some useful new features.

Added variable importance tests via interface with the vip package
Added clamping for the predict functions, including plots of where
clamping is happening
Added clamping for model construction functions, with a TRUE/FALSE
switch defaulting to TRUE
Changed naming conventions for predict functions so that the
suitability raster is in the $suitability slot, just as with
modeling functions
Added progress bars for a lot of tests
Added "verbose" option for a lot of functions, defaulting to FALSE

Bug fixes

Added some code to fix a bug with recalibration. Basically
CalibratR's call to parallel was tanking on Mac OS, and there's just
a little code snippet that needed to be added to the call to make
that work.
Fixed interactive.plot generic and moved the function to its own
file to make it easier to extend
Temporarily suppressing some warnings coming out of leaflet that
are being produced by the recent rgdal changes
Fixed background sampling code to resample when necessary
Changed enmtools.ranger demo code to actually use ranger instead
of rf
Fixed code for calculating p values for some of the hypothesis
tests, the old code was getting wrong answers when there were
repeated values
  <dc:title>danlwarren/ENMTools: ENMTools 1.0.1</dc:title>
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