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Journal article Open Access

Anti-clustering in the national SARS-CoV-2 daily infection counts

Roukema, Boudewijn F.

Produced and source files for "Anti-clustering in the national SARS-CoV-2 daily infection counts", 2020, by B. F. Roukema

  • subpoisson-02548e9.pdf - article in pdf format
  • WP_C19CCTF_SARSCoV2.dat - Wikipedia COVID-19 Case Count Task Force (C19CCTF) medical cases chart data on national daily SARS-CoV-2 infections in csv format; URLs of the specific versions of the source pages are included
  • WHO_vs_WP_jumps.dat - plain text table comparing jumpiness of WHO to C19CCTF national case count data
  • phi_N_full.dat - results: clustering parameter phi_i for full national daily infection counts above a threshold of 50 per day
  • phi_N_28days.dat - as for phi_N_full.dat, for the least noisy 28-day subsequence for each country
  • phi_N_14days.dat - as for phi_N_28days.dat, for 14-day subsequences
  • phi_N_07days.dat - as for phi_N_28days.dat, for 7-day subsequences
  • four files phi_N*_jhu.dat which are equivalent to the main tables, but for the JHU CSSE data, as listed in the appendix of the article
  • subpoisson-02548e9-git.bundle - git source package that can be unbundled with 'git clone subpoisson-02548e9-git.bundle' and used for reproducibility: to download data, do calculations, analyse them, plot them and produce the article pdf
  • subpoisson-02548e9-arXiv.tar.gz - source package for producing the article pdf, together with the reproducibility package, but without the git history; appropriate for ArXiv
  • software-252cf1c.tar.gz - this should contain all the software, apart from a minimal POSIX-compatible system, needed for compiling and installing the software used in producing this paper

Associated resources:

All the materials here are free-licensed, as stated in the individual files and packages.

Files (419.5 MB)
Name Size
phi_N_07days.dat
md5:f3a4a8491efcdf240602836e093c0f8f
7.0 kB Download
phi_N_07days_jhu.dat
md5:4e41cf330b9c6d0b2886d9f289075720
7.5 kB Download
phi_N_14days.dat
md5:54417a0866737deca3779231a61f68fc
7.0 kB Download
phi_N_14days_jhu.dat
md5:0fcc87035b2d97e75c85ef015dc53aab
7.5 kB Download
phi_N_28days.dat
md5:602a12cc830bd01ed25df6f963a800bc
7.0 kB Download
phi_N_28days_jhu.dat
md5:0be13e5bc4f17dba414956f445275e8a
7.5 kB Download
phi_N_full.dat
md5:c51f9fa01df6bd2f5cd0aaba19d8dd76
7.0 kB Download
phi_N_full_jhu.dat
md5:fcdc9730de6d54bc4f8b6a8ae17aa928
7.5 kB Download
software-252cf1c.tar.gz
md5:dc1ead627869d0d57c54c0d9bcaa95e1
412.5 MB Download
subpoisson-02548e9-arXiv.tar.gz
md5:3875dcf43a6fee40c13b0cdee99f1186
1.3 MB Download
subpoisson-02548e9-git.bundle
md5:fd8da658c89193e34745f0d961ea7021
4.7 MB Download
subpoisson-02548e9.pdf
md5:de7a678308c69d5471e2a34a0557d9cb
455.0 kB Download
WHO_vs_WP_jumps.dat
md5:0dad87386806a53590830c063f651d12
2.6 kB Download
WP_C19CCTF_SARSCoV2.dat
md5:06ebb91623bc3c6c6c44505bbbe34128
404.6 kB Download
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