Dataset Open Access

SARS-COV2 Spike Glycopeptide Mass-Retention Time PCDL database

Chalk, R; Greenland, W.; Moreira, T.; Coker, J.; Mukhopadhyay, S.; Williams, E.; Manning, C.; Bohstedt, T.; McCrorie, R.; Fernandez-Cid, A.; Burgess-Brown, N.


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{
  "inLanguage": {
    "alternateName": "eng", 
    "@type": "Language", 
    "name": "English"
  }, 
  "description": "<p>Contains accurate mass, HPLC retention time, peptide sequence, glycan structure and mass spectra for over 400 glycopeptides from elastase digestion of SARS-COV2 Spike antigen and receptor binding domain. The database is used as part of the Mass-Retention Time Fingerprinting method to characterise Spike glycans as described in the BioRxiv preprint &ldquo;Identification, Mapping and Relative Quantitation of SARS-Cov2 Spike Glycopeptides by Mass-Retention Time Fingerprinting&rdquo;</p>", 
  "license": "https://creativecommons.org/licenses/by/4.0/legalcode", 
  "creator": [
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Chalk, R"
    }, 
    {
      "affiliation": "Agilent Technologies", 
      "@type": "Person", 
      "name": "Greenland, W."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Moreira, T."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Coker, J."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Mukhopadhyay, S."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Williams, E."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Manning, C."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Bohstedt, T."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "McCrorie, R."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Fernandez-Cid, A."
    }, 
    {
      "affiliation": "University of Oxford", 
      "@type": "Person", 
      "name": "Burgess-Brown, N."
    }
  ], 
  "url": "https://zenodo.org/record/3958218", 
  "datePublished": "2020-07-23", 
  "version": "1", 
  "keywords": [
    "SARS-Cov2", 
    "Spike", 
    "RBD", 
    "Glycoprotein", 
    "Glycopeptide", 
    "Glycan", 
    "Mass Spectrometry", 
    "HPLC", 
    "Database"
  ], 
  "@context": "https://schema.org/", 
  "distribution": [
    {
      "contentUrl": "https://zenodo.org/api/files/e61e977f-c474-430d-81a5-3d7979209ac7/200713_Spike_MRTF_database.cdb", 
      "encodingFormat": "cdb", 
      "@type": "DataDownload"
    }, 
    {
      "contentUrl": "https://zenodo.org/api/files/e61e977f-c474-430d-81a5-3d7979209ac7/200713_Spike_MRTF_database.xlsx", 
      "encodingFormat": "xlsx", 
      "@type": "DataDownload"
    }
  ], 
  "identifier": "https://doi.org/10.5281/zenodo.3958218", 
  "@id": "https://doi.org/10.5281/zenodo.3958218", 
  "@type": "Dataset", 
  "name": "SARS-COV2 Spike Glycopeptide Mass-Retention Time PCDL database"
}
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