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Genomic analysis of the diversity, antimicrobial resistance and virulence potential of Campylobacter jejuni and Campylobacter coli strains from a private health care center in Central Chile

Veronica Bravo; Assaf Katz; Lorena Porte; Thomas Weitzel; Carmen Varela; Narjol Gonzalez-Escalona; Carlos Blondel


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  <identifier identifierType="DOI">10.5281/zenodo.3925206</identifier>
  <creators>
    <creator>
      <creatorName>Veronica Bravo</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-6743-6851</nameIdentifier>
      <affiliation>Unidad de Microbiología, Escuela de Medicina, Facultad de Ciencias Médicas, Universidad Santiago de Chile, Santiago, Chile</affiliation>
    </creator>
    <creator>
      <creatorName>Assaf Katz</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-5481-7399</nameIdentifier>
      <affiliation>Programa de Biología Celular y Molecular, ICBM, Facultad de Medicina, Universidad de Chile, Santiago, 8380453, Chile</affiliation>
    </creator>
    <creator>
      <creatorName>Lorena Porte</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-1175-5946</nameIdentifier>
      <affiliation>Laboratorio Clínico, Clínica Alemana de Santiago, Facultad de Medicina Clínica Alemana, Universidad del Desarrollo, Santiago, Chile</affiliation>
    </creator>
    <creator>
      <creatorName>Thomas Weitzel</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-9804-2123</nameIdentifier>
      <affiliation>Laboratorio Clínico, Clínica Alemana de Santiago, Facultad de Medicina Clínica Alemana, Universidad del Desarrollo, Santiago, Chile</affiliation>
    </creator>
    <creator>
      <creatorName>Carmen Varela</creatorName>
      <affiliation>Laboratorio Clínico, Clínica Alemana de Santiago, Facultad de Medicina Clínica Alemana, Universidad del Desarrollo, Santiago, Chile</affiliation>
    </creator>
    <creator>
      <creatorName>Narjol Gonzalez-Escalona</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-4568-0022</nameIdentifier>
      <affiliation>Center for Food Safety and Applied Nutrition, Office of Regulatory Science, Division of Microbiology, U.S. Food and Drug Administration, College Park, Maryland, USA</affiliation>
    </creator>
    <creator>
      <creatorName>Carlos Blondel</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-7099-6347</nameIdentifier>
      <affiliation>Instituto de Ciencias Biomédicas, Facultad de Medicina y Facultad de Ciencias de la Vida, Universidad Andrés Bello, 8320000, Santiago, Chile.</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Genomic analysis of the diversity, antimicrobial resistance and virulence potential of Campylobacter jejuni and Campylobacter coli strains from a private health care center in Central Chile</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <subjects>
    <subject>Campylobacter</subject>
    <subject>foodborne pathogen</subject>
    <subject>Chile</subject>
    <subject>comparative genomics</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2020-07-01</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3925206</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.3925205</relatedIdentifier>
  </relatedIdentifiers>
  <version>1.0</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Supplementary Dataset for the work entitled&amp;nbsp;&amp;quot;Genomic analysis of the diversity, antimicrobial resistance and virulence potential of Campylobacter jejuni and Campylobacter coli strains from a private health care center&amp;nbsp;in Central Chile&amp;quot;.&lt;/p&gt;

&lt;p&gt;This dataset includes bacterial draft genome sequence reannotations of 69 C. jejuni and 12 C. coli strains, the fasta file containing the nucleotide sequence of &lt;em&gt;Campylobacter&lt;/em&gt; pathogenicity genes screened for the virulome analysis and the&amp;nbsp;fasta file for the in-house database for plasmid screening analysis in &lt;em&gt;Campylobacter &lt;/em&gt;genomes.&lt;/p&gt;</description>
  </descriptions>
</resource>
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