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cosanlab/nltools: 0.4.0

Luke Chang; Sam; Eshin Jolly; Jin Hyun Cheong; Anton Burnashev; Andy Chen; Marissa Clark; Seth Frey

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<oai_dc:dc xmlns:dc="" xmlns:oai_dc="" xmlns:xsi="" xsi:schemaLocation="">
  <dc:creator>Luke Chang</dc:creator>
  <dc:creator>Eshin Jolly</dc:creator>
  <dc:creator>Jin Hyun Cheong</dc:creator>
  <dc:creator>Anton Burnashev</dc:creator>
  <dc:creator>Andy Chen</dc:creator>
  <dc:creator>Marissa Clark</dc:creator>
  <dc:creator>Seth Frey</dc:creator>
  <dc:description>New Functionality

Added new intersubject correlation (ISC) functionality. ISC function in stats module can compute different types of resampling tests (i.e., circular shifting, phase randomization, subject-wise bootstrapping. ISC method on Adjacency Class can perform subject-wise bootstrapping.
Added new intersubject functional connectivity (ISFC) functionality. Uses leave-one-subject out averaging method.
Added new dynamic intersubject phase synchrony (ISPS) functionality. Calculate length of average resultant vector, significance computed with parametric Rayleigh test.
roi_to_brain is now much faster when using arrays.
Added new timeseries permutation methods to correlation_permutation function (circle shifting and phase randomization)
Brain_Data has a new temporal_resample method to up and downsample timeseries

Bug Fixes

fixed smoothing bug
temporary fix to plotting bug. due to change to matlotlib api, colorbars on brain_data plots are not working correctly. Turned them off by default for now.
no longer pinning joblib to old version


updated and refactored align code.


Removed jackknife permutation method as we decided it wasn't working as we intended.
  <dc:title>cosanlab/nltools: 0.4.0</dc:title>
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