3923110
doi
10.5281/zenodo.3923110
oai:zenodo.org:3923110
Colin Diesh
Deepak
LBNL
S2KFan
Gregg Helt
Genomancer
Robert Buels
Monica Munoz-Torres
TISLab, OSU
Yating Liu
Helena Rasche
Anthony Bretaudeau
BIPAA/GenOuest
Stephen Ficklin
Justin Reese
Lawrence Berkeley National Lab
luke
OHSU Computational Biology Department
hsiao yi
Robert Syme
NehaVC
childers
Michael Paulini
WormBase
Tim Stickland
Wellcome Sanger Institute
Aymeric Naômé
Cory Maughmer
@TAMU-CPT
Kim Rutherford
Uni of Cambridge / @PomBase
Liam Gretton
Mikkel Christensen
EBI
The Gitter Badger
Gitter
Eric Y
UC Berkeley
Jun-Wei Lin
rbelnap
wesleyemason
GMOD/Apollo: 2.6.1
Nathan Dunn
Lawrence Berkeley National Lab
url:https://github.com/GMOD/Apollo/tree/2.6.1
info:eu-repo/semantics/openAccess
Other (Open)
<p><strong>2.6.1 Official Release</strong></p>
<p>This is a minor release with bug fixes and feature changes.</p>
<p>Infrastructure Changes</p>
<ul>
<li>Upgrade to <a href="https://github.com/GMOD/jbrowse/releases/tag/1.16.9">JBrowse 1.16.9</a> / <a href="https://github.com/GMOD/Apollo/pull/2489">2489</a>. </li>
<li>Fixed Python dependency for Travis for BioPython (3.7) and upgraded to Xenial <a href="https://github.com/GMOD/Apollo/pull/2493">2493</a>.</li>
<li>Updated internal Docker Python script to add to use the <a href="https://pypi.org/project/apollo/">Apollo 4.2.3 library</a>.</li>
</ul>
<p>Bug Fixes</p>
<ul>
<li>Tabix upload of tracks was not including the index file <a href="https://github.com/GMOD/Apollo/pull/2487">2487</a>. </li>
<li>Fasta file was displaying the wrong file formats <a href="https://github.com/GMOD/Apollo/pull/2486">2486</a>. </li>
<li>Removed unused database migration script causing issues with mysql <a href="https://github.com/GMOD/Apollo/commit/d50f0618874ae194e88d959d2b9a802f3a1ba7fa>">d50f061887</a>. </li>
<li>Allow addition of a controller vocabulary for Gene Product Description <a href="https://github.com/GMOD/Apollo/pull/2488">2488</a>. </li>
<li>Fixed ECO evidence code links <a href="https://github.com/GMOD/Apollo/pull/2491">2491</a>.</li>
<li>Fixed load-link urls <a href="https://github.com/GMOD/Apollo/pull/2500">2500</a>.</li>
</ul>
<p>Full change long for all versions can be found here: <a href="https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md">https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md</a></p>
<p>Docker builds are on quay.io and docker hub:</p>
<p><a href="https://quay.io/repository/gmod/apollo?tab=builds">https://quay.io/repository/gmod/apollo?tab=builds</a>
<a href="https://hub.docker.com/r/gmod/apollo">https://hub.docker.com/r/gmod/apollo</a>
Please review the documentation pages for more details: <a href="http://genomearchitect.readthedocs.io/en/latest/">http://genomearchitect.readthedocs.io/en/latest/</a></p>
<p>Note: You can find a guide upgrading existing Apollo installations here:
<a href="https://genomearchitect.readthedocs.io/en/latest/Migration.html">https://genomearchitect.readthedocs.io/en/latest/Migration.html</a></p>
<p><a href="https://github.com/GMOD/Apollo/issues">Report issues</a> if found.
Active mailing list (apollo@lbl.gov) and <a href="https://groups.google.com/a/lbl.gov/forum/#!forum/apollo">google group</a>.</p>
Zenodo
2020-06-29
info:eu-repo/semantics/other
598056
2.6.1
1672783701.689598
94154040
md5:73bff1a6d96810bcc0d7fe9beac992ba
https://zenodo.org/records/3923110/files/GMOD/Apollo-2.6.1.zip
public
https://github.com/GMOD/Apollo/tree/2.6.1
Is supplement to
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isVersionOf
doi