GMOD/Apollo: 2.6.1

2.6.1 Official Release

This is a minor release with bug fixes and feature changes.

Infrastructure Changes

• Upgrade to JBrowse 1.16.9 / 2489.
• Fixed Python dependency for Travis for BioPython (3.7) and upgraded to Xenial 2493.
• Updated internal Docker Python script to add to use the Apollo 4.2.3 library.

Bug Fixes

• Tabix upload of tracks was not including the index file 2487.
• Fasta file was displaying the wrong file formats 2486.
• Removed unused database migration script causing issues with mysql d50f061887.
• Allow addition of a controller vocabulary for Gene Product Description 2488.
• Fixed ECO evidence code links 2491.
• Fixed load-link urls 2500.

Full change long for all versions can be found here: https://github.com/GMOD/Apollo/blob/develop/ChangeLog.md

Docker builds are on quay.io and docker hub:

https://quay.io/repository/gmod/apollo?tab=builds https://hub.docker.com/r/gmod/apollo Please review the documentation pages for more details: http://genomearchitect.readthedocs.io/en/latest/

Note: You can find a guide upgrading existing Apollo installations here: https://genomearchitect.readthedocs.io/en/latest/Migration.html

Report issues if found. Active mailing list (apollo@lbl.gov) and google group.