June 3, 2020 Presentation Open Access

Martin Himly (PLUS); Iseult Lynch; Dieter Maier; Philip Doganis

DataCite XML Export

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  <identifier identifierType="DOI">10.5281/zenodo.3908229</identifier>
  <creators>
    <creator>
      <creatorName>Martin Himly (PLUS)</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-5416-085X</nameIdentifier>
      <affiliation>Paris Lodron University of Salzburg, Dept. Biosciences</affiliation>
    </creator>
    <creator>
      <creatorName>Iseult Lynch</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0003-4250-4584</nameIdentifier>
      <affiliation>University of Birmingham</affiliation>
    </creator>
    <creator>
      <creatorName>Dieter Maier</creatorName>
      <affiliation>Biomax Informatics</affiliation>
    </creator>
    <creator>
      <creatorName>Philip Doganis</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-0628-8434</nameIdentifier>
      <affiliation>National Technical University of Athens</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Online Jaqpot Hackathon - Take your research from the bench to the community by making your models available as a web service</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <subjects>
    <subject>Nanosafety assessment</subject>
    <subject>e-tools</subject>
    <subject>modelling</subject>
    <subject>data FAIRness</subject>
    <subject>nanoinformatics</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2020-06-03</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Text">Presentation</resourceType>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3908229</alternateIdentifier>
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  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.3908228</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/acbn-research-center</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/nanocommons</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/nsc</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
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  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Under the subtitle &lt;strong&gt;&amp;ldquo;Take your research from the bench to the community by making your models available as a web service&amp;rdquo;,&lt;/strong&gt; attendees learned how to use the &lt;em&gt;Jaqpot&lt;/em&gt; suite and python to go from data to model, starting from a common CSV file.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;&lt;em&gt;Jaqpot &lt;/em&gt;is a computational platform for &lt;em&gt;in silico&lt;/em&gt; modelling of chemical compounds, that provides both access to its services both over a User Interface (GUI) and an Application Programming Interface (API). It is a cloud-ready application that uses the benefits of Java, R and Python, having incorporated functionality by various established and open-source machine learning and data analysis toolkits, while algorithms in any programming algorithm can be added to Jaqpot.&lt;/p&gt;

&lt;p&gt;Attached you find the following presentations:&lt;/p&gt;

&lt;p&gt;1. Intro to NanoCommons by Martin Himly, PLUS&lt;/p&gt;

&lt;p&gt;2. Electronic Lab Notebooks by Iseult Lynch, UoB&lt;/p&gt;

&lt;p&gt;3. NanoCommons Knowledgebase by Dieter Maier, Biomax&lt;/p&gt;

&lt;p&gt;4. Jaqpot Suite by Philip Doganis, NTUA&lt;/p&gt;</description>
  </descriptions>
  <fundingReferences>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/100010661</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/731032/">731032</awardNumber>
      <awardTitle>The European Nanotechnology Community Informatics Platform: Bridging data and disciplinary gaps for industry and regulators (NanoCommons)</awardTitle>
    </fundingReference>
  </fundingReferences>
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