Annotation
literal: The ExaMode Ontology

Annotation
literal: The ExaMode Ontology, version 0.2. This ontology models four types of clinical cases: cervix cancer, lung cancer, colon cancer, celiac disease. The current version models only the colon cancer case. The aim of this ontology is to model medical reports about colon cancer. The ideal employement of this ontology is for linking entities extracted from medical reports.

AnnotationAssertion
IRI: http://dbpedia.org/page/Radboud_University_Nijmegen
literal: Radboud University Nijmegen (abbreviated as RU, Dutch: Radboud Universiteit Nijmegen, formerly Katholieke Universiteit Nijmegen) is a public university with a strong focus on research located in Nijmegen, the Netherlands. It was established on 17 October 1923 and is situated in the oldest city of the Netherlands. The RU has seven faculties and enrolls over 19,900 students. It was internationally ranked 156th by the QS World University Rankings.

AnnotationAssertion
IRI: http://dbpedia.org/page/Radboud_University_Nijmegen
literal: Radboud Universiteit Nijmegen

AnnotationAssertion
IRI: http://dbpedia.org/page/Radboud_University_Nijmegen
IRI: General

AnnotationAssertion
IRI: http://linkedlifedata.com/resource/umls/id/C0521191
literal: PRE-CANCEROUS DYSPLASIA, SUSP.FOR MALIGNANCY

AnnotationAssertion
IRI: http://linkedlifedata.com/resource/umls/id/C0521191
literal: Pre-Cancerous Dysplasia

AnnotationAssertion
IRI: http://linkedlifedata.com/resource/umls/id/C0521191
literal: M74009

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/IDOMAL_0000603
literal: A person under health care. The person may be waiting for this care or may be receiving it or may have already received it.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/IDOMAL_0000603
literal: Patient

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/IDOMAL_0000603
literal: Patient @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/IDOMAL_0000603
literal: Paziente @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0000001
literal: disease; disease or disorder; disease or disorder, non-neoplastic; other disease; diseases; condition; disorder; disorders; medical condition; diseases and disorders

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0000001
literal: A disease is a disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0000001
literal: Disease or Disorder

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002032
literal: colonic carcinoma; carcinoma of colon; colon carcinoma; colon cancer; carcinoma of the colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002032
literal: A carcinoma that arises from epithelial cells of the colon [database_cross_reference: MONDO:DesignPattern]

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002032
literal: colon carcinoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002032
IRI: General

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002271
literal: colonic adenocarcinoma; adenocarcinoma of the colon; colon adenocarcinoma; adenocarcinoma of colon; adenocarcinoma - colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002271
literal: COAD

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002271
literal: A carcinoma that arises from glandular epithelial cells of the colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0002271
literal: Colon Adenocarcinoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: Lymphadenitis; colitis; colon inflammation; inflammation of colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: Inflammation of the colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: Colitis

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: M40000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: M40070

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0005292
literal: C0009319

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006152
literal: inflammatory polyp of colon; inflammatory polyp of the colon; colonic inflammatory polyp.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006152
literal: A non-neoplastic polypoid lesion in the colon. It may arise in a background of inflammatory bowel disease or colitis. It is characterized by the presence of a distorted epithelium, inflammation, and fibrosis.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006152
literal: Colon Inﬂammatory Polyp

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006498
literal: colonic adenomatous polyp; adenomatous polyp of colon; colon adenomatous polyp; adenomatous polyp of the colon; Adenomatous polyp

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006498
literal: A polypoid adenoma that arises from and protrudes into the lumen of the colon. Epithelial dysplasia is always present. According to the architectural pattern it is classified as tubular, tubulovillous, or villous.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006498
literal: Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0006498
literal: M814000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021271
literal: villous adenoma of colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021271
literal: A villous adenoma that involves the colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021271
literal: Colon Villous Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021271
literal: M82611

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021271
literal: M826110

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021400
literal: colon polyp; polyp of the colon; colonic polyp

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021400
literal: A polyp that involves the colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/MONDO_0021400
literal: Polyp of Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C13717
literal: Location; Anatomic Site

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C13717
literal: Named locations of or within the body.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C13717
literal: We use this as a semantical class for a location of the body. Similar to Topology, but since we are already using that as a class, we did not want to use the same class for this role.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C13717
literal: Anatomical Location

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15189
literal: Bx; BIOPSY; biopsy; Biopsy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15189
literal: The removal of cells or tissues for examination by a pathologist. The pathologist may study the tissue under a microscope or perform other tests on the cells or tissue. There are many different types of biopsy procedures. The most common types include: (1) incisional biopsy, in which only a sample of tissue is removed; (2) excisional biopsy, in which an entire lump or suspicious area is removed; and (3) needle biopsy, in which a sample of tissue or fluid is removed with a needle.; The removal of tissue specimens or fluid from the living body for microscopic examination, performed to establish a diagnosis.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15189
literal: Biopsy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15189
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15220
literal: The investigation, analysis and recognition of the presence and nature of disease, condition, or injury from expressed signs and symptoms; also, the scientific determination of any kind; the concise results of such an investigation.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15220
literal: Diagnosis

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15220
IRI: General

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: Health Care Activity

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: A procedure to remove or repair a part of the body or to find out whether disease is present. An operation.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: Operation; surgery; Surgery; Surgical Interventions; Surgical Procedures; Surgically; Surgical Procedure; Type of Surgery; Surgical

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: A diagnostic or treatment procedure performed by manual and/or instrumental means, often involving an incision and the removal or replacement of a diseased organ or tissue; of or relating to or involving or used in surgery or requiring or amenable to treatment by surgery.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: Type of Intervention that is a surgical procedure.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
literal: Surgical Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15329
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
literal: Diagnostic Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
literal: Endoscopy and Biopsy; Endoscopic Biopsy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
literal: The removal of tissue specimens or fluid from the living body for microscopic examination, performed to establish a diagnosis. In the case of an endoscopic biopsy, an endoscope is used to obtain the sample.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
literal: Endoscopic Biopsy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
literal: P41****

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15389
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C156083
literal: Finding

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C156083
literal: A subjective characterization of the phenomenon of dysplasia, based on microscopic examination of the architectural and/or cytological changes in a tissue sample, that is determined to be high.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C156083
literal: High Grade Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: Therapeutic or Preventive Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: A procedure to connect healthy sections of tubular structures in the body after the diseased portion has been surgically removed.; A natural or surgically-induced connection between tubular structures in the body.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: A natural or surgically-induced connection between tubular structures in the body.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: Anastomosis

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: M18200

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C15609
literal: C0677554

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
literal: Removal Technique; Resection; Surgical Resection

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
literal: A surgical procedure in which tissue is removed.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
literal: Resection

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
literal: P11000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C158758
literal: C0015252

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: Laboratory Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: Antigen aggregation with antibody, in the right ratios, to cause precipitation.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: IMMUNOPRECIPITATION; IP; Immunoprecipitation; I.P. REACTION

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: Antigen aggregation with antibody, in the right ratios, to cause precipitation. [def-source: NCI]

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: Immunoprecipitation

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
literal: P38200

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C16724
IRI: Test

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: Subject self-identification re: masculine/feminine. [IOM] See also sex.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: Gender

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: gender

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: The assemblage of properties that distinguish people on the basis of the societal roles expected for the two sexes.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: We defined our gender as one of two: male or female.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
literal: gender

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C17357
IRI: General

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: Finding

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: A specific result or effect that can be measured. Examples of outcomes include decreased pain, reduced tumor size, and improvement of disease.; 1. events or experiences that clinicians or investigators examining the impact of an intervention or exposure measure because they believe such events or experiences may be influenced by the intervention or exposure. 2. (SDTM) The result of carrying out a mathematical or statistical procedure. NOTE: 1. such events and experiences are called clinical outcomes independently of whether they are part of the original question/protocol of the investigation. [1. Guyatt, G., Schunemann H., Dept. epidemiology & statistics, McMaster University-personal communication] See also variable; outcome can be a result of analysis; outcome is more general than endpoint in that it does not necessarily relate to a planned objective of the study.outcome. The measureable characteristic (clinical outcome assessment, biomarker) that is influenced or affected by an individual's baseline state or an intervention as in a clinical trial or other exposure.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: OUT; result; Result; Outcome; outcome

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: A class representing a general outcome, whatever it may be (positive, negative, uncertain, not enough information etc).

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: The result of an action.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C20200
literal: Outcome

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
literal: The drug, device, therapy, or process under investigation in a clinical study that is believed to have an effect on outcomes of interest in a study (e.g., health-related quality of life, efficacy, safety, pharmacoeconomics). See also: test articles; devices; drug product; medicinal product; combination product.; In medicine, a treatment or action taken to prevent or treat disease, or improve health in other ways.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
literal: interventionDescription; intervention; Intervention; Procedure; Intervention Strategies; Interventional; Intervention or Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
literal: An activity that produces an effect, or that is intended to alter the course of a disease in a patient or population. This is a general term that encompasses the medical, social, behavioral, and environmental acts that can have preventive, therapeutic, or palliative effects.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
literal: This general class represents the intervention performed on the patient to obtain the samples that are then studied to find the disease. In particular, this class represents the attribute 'MATERIALI' in the AOEC Database, and the attribute METHOD in the TCGA database.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
literal: Intervention or Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25218
IRI: General

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
literal: Polypectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
literal: Complete or partial removal of a polypoid lesion from the mucosal surface.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
literal: Polypectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
literal: Presence of jeyword "polipectomia" in "Materiali"

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C25349
literal: Complete or partial removal of a polypoid lesion from the mucosal surface.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: A circumscribed loss of integrity of the skin or mucous membrane.; Destruction of an epithelial surface extending into or beyond the basement membrane.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: Ulcerative Inflammation; Ulcer; Ulceration; Ulcers; Ulcerated; ulcer; ULCER; Ulcerative

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: A circumscribed inflammatory and often suppurating lesion on the skin or an internal mucous surface resulting in necrosis of tissue.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: Ulcer

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: M40030

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C3426
literal: C0041582

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C38034
literal: The description of an anatomical region or of a body part.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C38034
literal: Topography

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4086
literal: Dyscrasia; Dysplasia; Dysplastic; dyscrasia; dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4086
literal: A usually neoplastic transformation of the cell, associated with altered architectural tissue patterns. The cellular changes include nuclear and cytoplasmic abnormalities. Molecular genetic abnormalities are also often found and, in some instances, may lead to cancer.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4086
literal: Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4086
literal: M74000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: Metastatic Adenocarcinoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: An adenocarcinoma which has spread from its original site of growth to another anatomic site.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: Metastatic Adenocarcinoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: M80106

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: M81406

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4124
literal: C0334277

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46109
literal: Qualitative Concept

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46109
literal: Male Gender, Self Report; Male; Male Gender; Male Gender, Self Reported

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46109
literal: A person who belongs to the sex that normally produces sperm. The term is used to indicate biological sex distinctions, cultural gender role distinctions, or both.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46109
literal: An individual who reports belonging to the cultural gender role distinction of male

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46109
literal: male

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46110
literal: Female Gender, Self Reported; Female Gender, Self Report; Female; Female Gender

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46110
literal: A person who belongs to the sex that normally produces ova. The term is used to indicate biological sex distinctions, or cultural gender role distinctions, or both. [def-source: NCI]

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46110
literal: An individual who reports belonging to the cultural gender role distinction of female.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C46110
literal: female gender

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C47891
literal: Activity

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C47891
literal: A general class representing a test.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C47891
literal: A procedure for critical evaluation; a means of determining the presence, quality, or truth of something

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C47891
literal: test

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C47891
IRI: Test

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4847
literal: Finding

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4847
literal: Dysplasia of the Colon; Colonic Dysplasia; Dysplasia of Colon; Colon Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4847
literal: A morphologic finding indicating the presence of dysplastic glandular epithelial cells in the colonic mucosa. There is no evidence of invasion.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4847
literal: Colon Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4848
literal: Low Grade Dysplasia of the Colon; Low-Grade Dysplasia of Colon; Low-Grade Dysplasia of the Colon; Mild Dysplasia of Colon; Low-Grade Colon Dysplasia; Mild Colon Dysplasia; Low-Grade Colonic Dysplasia; Mild Colonic Dysplasia; Mild Dysplasia of the Colon; Low Grade Colon Dysplasia; Low Grade Colonic Dysplasia; Low Grade Dysplasia of Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4848
literal: A morphologic finding indicating the presence of mild dysplastic cellular changes and mild architectural changes in the glandular epithelium of the colonic mucosa. There is no evidence of invasion.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4848
literal: Mild Colon Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4849
literal: Finding

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4849
literal: Moderate Dysplasia of the Colon; Moderate Colonic Dysplasia; Moderate Colon Dysplasia; Moderate Dysplasia of Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4849
literal: A morphologic finding indicating the presence of moderate dysplastic cellular changes and moderate architectural changes in the glandular epithelium of the colonic mucosa. There is no evidence of invasion.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4849
literal: Moderate Colon Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4930
literal: Disease or Syndrome

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4930
literal: Hyperplastic Colonic Polyp; Colon HP; Metaplastic Polyp of the Colon; Metaplastic Polyp of Colon; Metaplastic Colonic Polyp; Hyperplastic Polyp of the Colon; Metaplastic Colon Polyp; Hyperplastic Polyp of Colon; Colon Metaplastic Polyp; Colon MP; Colon Hyperplastic Polyp; Colonic Hyperplastic Polyp

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4930
literal: A serrated polypoid lesion that arises in the colon. It is usually found in the distant colon and it rarely produces symptoms. This group includes goblet cell rich, mucin poor, and microvesicular hyperplastic polyps.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4930
literal: Colon Hyperplastic Polyp

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C4930
literal: M72040

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
literal: Colonoscopic Biopsy; Colonoscopy and Biopsy; Biopsy of Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
literal: Removal of tissue from the colon for microscopic examination, using an endoscope.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
literal: Biopsy of Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
literal: P11400

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
literal: P40****

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51678
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51688
literal: Colonoscopic Polypectomy; Colonic Polypectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51688
literal: Complete or partial removal of a polypoid lesion from the mucosal surface of the large intestine.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51688
literal: Colonoscopic polypectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51688
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51944
literal: Occupational Activity

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51944
literal: A diagnostic test in which an antibody is used to link a cellular antigen specifically to a stain that can be seen with a microscope.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51944
literal: Immunohistochemical Test

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51944
literal: presence of word CD3 test immunoistochimico colorazione immunoistochimica

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C51944
IRI: Test

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C5496
literal: Gene or Genome

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C5496
literal: Tubulovillous Adenoma of Colon; Colon Tubulovillous Adenoma; Tubulovillous Adenoma of the Colon; Colonic Tubulovillous Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C5496
literal: A neoplasm that arises from the glandular epithelium of the colonic mucosa. It is characterized by tubular and villous architectural patterns. The neoplastic glandular cells have dysplastic features

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C5496
literal: Colon Tubulovillous Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C5496
literal: M826300

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C7041
literal: Colon Tubular Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C7041
literal: A usually polypoid neoplasm that arises from the glandular epithelium of the colonic mucosa. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C7041
literal: Colon Tubular Adenoma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C7041
literal: M821100

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8362
literal: CIN 1; DYSPLASIA, MILD; MILD DYSPLASIA, CIN 1

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8362
literal: A morphologic finding indicating the presence of mild cellular atypia associated with mild architectural changes in a tissue sample.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8362
literal: Mild Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8362
literal: M74006

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8363
literal: Moderate Dysplasia; CIN 2; DYSPLASIA, MODERATE; MODERATE DYSPLASIA, CIN 2

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8363
literal: A morphologic finding indicating the presence of moderate cellular atypia associated with moderate architectural changes in a tissue sample.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8363
literal: Moderate Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8363
literal: M74007

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: Finding

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: Severe Dysplasia; CIN 3; DYSPLASIA, SEVERE; SEVERE DYSPLASIA, CIN 3

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: A morphologic finding indicating the presence of severe cellular atypia associated with severe architectural changes in a tissue sample.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: Displasia Grave @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: Severe Dysplasia

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C8364
literal: svær dysplasi @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
literal: Hemicolectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
literal: Surgical removal of approximately half of the colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
literal: Hemicolectomy

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
literal: P11150

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
IRI: Procedure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_C86074
literal: C0546535

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: Semantic_Type

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: Semantic_Type

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: A property that represents a description of the sort of thing or category to which a concept belongs in the context of the UMLS semantic network.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: In general, applying semantic types aids in allowing users (or computer programs) to draw conclusions about concepts by virtue of the categories to which they have been assigned. We use a set of semantic types developed for the UMLS Metathesaurus. There are currently 134 semantic types in the UMLS. NB: this property is different from hasSemanticArea since this property serves as an annotation to give, when possible, a label indicating the semantic type. This label is taken from Ontobee. hasSemanticArea is used instead to give a tag to every entity, identifying what type of entity that is.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: Used to specify the semantic type of something.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: has semantic type

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P106
literal: Semantic Type

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P108
literal: Preferred Term; Preferred_Name; Preferred Name

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P108
literal: A property representing the word or phrase that NCI uses by preference to refer to the concept.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P108
literal: When something has a preferred name, you should specify it.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P108
literal: Preferred Name

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P325
literal: Alternativ definition @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P325
literal: Alternative Definition

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/NCIT_P325
literal: Definizione alternativa @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OAE_0001850
literal: An inflammation AE that shows localized nodular inflammation found in tissues.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OAE_0001850
literal: Granuloma

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OAE_0001850
literal: M44000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OAE_0001850
literal: C0018188

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: intra-epitheliale lymfocyten hoeveelheid @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: intraepithelial lymphocyte amount

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: quantità di linfociti intraepiliteliali @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: LIE, ILE

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: entorociti"

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: linfociti

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/OBA_0004525
literal: linfociti intraepiteliali pari a

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: Vertebrate specific. In arthropods 'abdomen' is the most distal section of the body which lies behind the thorax or cephalothorax. If need be we can introduce some grouping class

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: abdominopelvis; abdominopelvic region

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: belly; celiac region; adult abdomen

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: The subdivision of the vertebrate body between the thorax and pelvis. The ventral part of the abdomen contains the abdominal cavity and visceral organs. The dorsal part includes the abdominal section of the vertebral column.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: Abdomen

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: TY4100

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0000916
literal: C0000726

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: terminal portion of intestine

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: terminal portion of large intestine; rectal sac; intestinum rectum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: Rectum, Not Otherwise Specified.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: The terminal portion of the intestinal tube, terminating with the anus.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: Rectum, NOS

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: Presence of keyword "Rectum NOS" in "Materiali" field in AOEC Database.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001052
literal: T68000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: caecum; cecum; intestinum crassum caecum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: intestinum crassum cecum; intestinum caecum; blindgut; blind intestine

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: A pouch in the digestive tract that connects the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: Caecum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: Keyword Caecum in "Materiali" field

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001153
literal: T67100

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: large bowel

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: hindgut

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: Colon, Not Otherwise Specified

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: Last portion of the large intestine before it becomes the rectum.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: Colon, NOS

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001155
literal: T67000

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001156
literal: colon ascendens

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001156
literal: spiral colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001156
literal: Section of colon which is distal to the cecum and proximal to the transversecolon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001156
literal: Ascending Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001156
literal: T67200

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001157
literal: colon transversum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001157
literal: The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001157
literal: Transverse Colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001157
literal: Keyword "trasverso" in "Materiali" field.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001157
literal: T67400

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001158
literal: colon descendens

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001158
literal: The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001158
literal: Descending colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001158
literal: T67600

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001159
literal: colon sigmoideum; pelvic colon; sigmoid colon; sigmoid flexure

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001159
literal: The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001159
literal: Sigmoid colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0001159
literal: T67700

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0002116
literal: intestinum ileum; lower intestine; posterior intestine; distal intestine

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0002116
literal: The portion of the small intestine that extends from the jejunum to the colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0002116
literal: Ileum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0002116
literal: T67921

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0002116
literal: The ileum is the final section of the small intestine in most higher vertebrates, including mammals, reptiles, and birds. In fish, the divisions of the small intestine are not as clear and the terms posterior intestine or distal intestine may be used instead of ileum.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0003346
literal: mucous membrane of rectum; rectum mucous membrane; mucosa of organ of rectum; rectal mucosa; rectum mucosa; rectal mucous membrane; rectum mucosa of organ; organ mucosa of rectum; rectum organ mucosa

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0003346
literal: A mucosa that is part of a rectum

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0003346
literal: Rectal mucous membrane

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0003346
literal: T68010

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008971
literal: distal colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008971
literal: The distal portion of the colon; it develops embryonically from the hindgut and functions in the storage and elimination of waste.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008971
literal: Left colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008971
literal: T67995

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008972
literal: proximal colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008972
literal: The proximal portion of the colon, extending from the ileocecal valve usually to a point proximal to the left colic flexure; it develops embryonically from the terminal portion of the midgut and functions in absorption.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008972
literal: Right colon

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0008972
literal: T67965

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0036214
literal: rectosigmoid region

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0036214
literal: An anatomical junction that is between the sigmoid colon and rectum.

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0036214
literal: Rectosigmoid junction

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBERON_0036214
literal: T67921

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000001
literal: Alternativ definition @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000001
literal: Definizione alternativa @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000001
literal: External definition

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000010
literal: Note strutturali @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000010
literal: Strukturelle noter @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/UBPROP_0000010
literal: structure notes

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/VT_0010209
literal: duodenum villi lengte @nl

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/VT_0010209
literal: duodenum villi length

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/VT_0010209
literal: lunghezza dei villi del duodeno @it

AnnotationAssertion
IRI: http://purl.obolibrary.org/obo/VT_0010209
literal: "villi" + characterization

AnnotationAssertion
IRI: http://purl.org.spar/fabio/ClinicalCaseReport
literal: This is the main class of the ontology. The Clinical Case is one record in the database, and in this version of the ontology may be of one of four diseases: celiac disease, lung cancer, cervix cancer, colon cancer. This class is sub-instantiated to the other different sub-classes

AnnotationAssertion
IRI: http://purl.org.spar/fabio/ClinicalCaseReport
literal: Clinical Case Report

AnnotationAssertion
IRI: http://purl.org.spar/fabio/ClinicalCaseReport
IRI: General

AnnotationAssertion
IRI: http://purl.org/dc/elements/1.1/identifier
literal: Property connecting a case to its id

AnnotationAssertion
IRI: http://purl.org/dc/elements/1.1/identifier
literal: identifier

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym
literal: A property to connect an entity to broad synonyms.

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym
literal: ha sinonimi generali @it

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym
literal: har generiske synonymer @nl

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym
literal: has broad synonym

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym
literal: An alias in which the alias exhibits true synonymy.

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym
literal: ha sinonimi esatti @it

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym
literal: har nøjagtige synonymer @nl

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasExactSynonym
literal: has Exact Synonym

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym
literal: ha sinonimi correlati @it

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym
literal: har relaterede synonymer @nl

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym
literal: has related synonym

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasSynonym
literal: ha sinonimo @it

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasSynonym
literal: har synonym @nl

AnnotationAssertion
IRI: http://www.geneontology.org/formats/oboInOwl#hasSynonym
literal: has synonym

AnnotationAssertion
abbreviated IRI: rdf:Bag
literal: Bag

AnnotationAssertion
abbreviated IRI: xsd:anyURI
literal: General string identifier, interoperability purposes with the HIS.

AnnotationAssertion
abbreviated IRI: xsd:anyURI
literal: ha ID @it

AnnotationAssertion
abbreviated IRI: xsd:anyURI
literal: har id @nl

AnnotationAssertion
abbreviated IRI: xsd:anyURI
literal: has ID

AnnotationAssertion
abbreviated IRI: owl:partOf
literal: partOf

AnnotationAssertion
IRI: http://www.w3.org/2004/02/skos/core#broader
literal: Property used to build a hierarchy among the elements of an annotation. When one thing that can be an annotation to an outcome is inside a hierarchy, it is connected to its parent through this property.

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: An agent that made this thing.

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: In this ontology the property maker usually connects a clinical case report to the organization that produced it. For future possibilities, we put domain and range to owl:Thing.

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: The maker property relates something to a Agent that made it. As such it is an inverse of the made property. The name (or other rdfs:label) of the maker of something can be described as the dc:creator of that thing. For example, if the thing named by the URI http://danbri.org/ has a maker that is a Person whose name is 'Dan Brickley', we can conclude that http://danbri.org/ has a dc:creator of 'Dan Brickley'.

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: maker

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: maker @nl

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/maker
literal: produttore @it

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/organization
literal: An organization that, in the context of the ExaMode program, provides clinical case records. It is usually an Hospital (e.g. AOEC or Radbound).

AnnotationAssertion
IRI: http://xmlns.com/foaf/0.1/organization
literal: Organization

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003581
literal: Onset of disease manifestations in adulthood, defined here as at the age of 16 years or later.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003581
literal: Adult onset

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003581
literal: Gruppo d'età adulta @it

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003581
literal: voksen alder gruppe @nl

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003584
literal: A type of adult onset with onset of symptoms after the age of 60 years.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003584
literal: Gruppo d'età tarda @it

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003584
literal: Late onset

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003584
literal: Sen aldersgruppe @nl

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003596
literal: A type of adult onset with onset of symptoms at the age of 40 to 60 years.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003596
literal: Aldersgruppe i middelalderen @nl

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003596
literal: Gruppo d'età della mezza età @it

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003596
literal: Middle age onset

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003674
literal: The age group in which disease manifestations appear.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003674
literal: This class represents a generic age group.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003674
literal: Gruppo d'età @it

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003674
literal: Onset

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0003674
literal: aldersgruppe @nl

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0011462
literal: Onset of disease at the age of between 16 and 40 years.

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0011462
literal: Ung voksen aldersgruppe @nl

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0011462
literal: Gruppo d'età giovane adulto @it

AnnotationAssertion
IRI: https://hpo.jax.org/app/browse/term/HP:0011462
literal: Young adult onset

AnnotationAssertion
IRI: Annotation
literal: A general class to represent all the kinds of annotations that may be needed in a medical report.

AnnotationAssertion
IRI: Annotation
literal: Annotation

AnnotationAssertion
IRI: Annotation
literal: Annotazione @it

AnnotationAssertion
IRI: Annotation
literal: anmærkning @nl

AnnotationAssertion
IRI: AssociatedDisease
literal: In this ontologies different entities were developed to deal with specific entities. This property is used to link one entity to the corresponding disease it was defined for. It is just some more information to keep track of the nature of entities and to what disease they originally belong.

AnnotationAssertion
IRI: AssociatedDisease
literal: associated disease

AnnotationAssertion
IRI: AssociatedDisease
literal: malattia associata @it

AnnotationAssertion
IRI: AssociatedDisease
literal: tilknyttet sygdom @nl

AnnotationAssertion
IRI: BooleanCheckElement
literal: A set of checks controlled on an Immunohistochemical test that can only have a boolean result (positive - negative).

AnnotationAssertion
IRI: BooleanCheckElement
literal: Boolean Check Element

AnnotationAssertion
IRI: BooleanCheckElement
literal: Check booleano @it

AnnotationAssertion
IRI: BooleanCheckElement
literal: boolsk check @nl

AnnotationAssertion
IRI: BooleanCheckElement
IRI: Test

AnnotationAssertion
IRI: Cannizzaro_Hospital
literal: Entity representing the Cannizzaro Hospital as producer of medical report

AnnotationAssertion
IRI: Cannizzaro_Hospital
literal: Cannizzaro Hospital

AnnotationAssertion
IRI: Cannizzaro_Hospital
literal: Cannizzaro Hospital @nl

AnnotationAssertion
IRI: Cannizzaro_Hospital
literal: Ospedale di Cannizzaro @it

AnnotationAssertion
IRI: CheckElement
literal: This is a set of elements containing all the possible checks that a patient may do for a disease.

AnnotationAssertion
IRI: CheckElement
literal: Check Element

AnnotationAssertion
IRI: CheckElement
literal: Elemento di controllo @it

AnnotationAssertion
IRI: CheckElement
literal: kontrollere @nl

AnnotationAssertion
IRI: CheckElement
IRI: Test

AnnotationAssertion
IRI: ColonAnnotation
literal: A class that is a container for elements that may or may not be found in a colon case. Originally thought to have Dysplasia.

AnnotationAssertion
IRI: ColonAnnotation
literal: Annotazione sul Colon @it

AnnotationAssertion
IRI: ColonAnnotation
literal: Colon Annotation

AnnotationAssertion
IRI: ColonAnnotation
literal: kolon annotation @nl

AnnotationAssertion
IRI: ColonAnnotation
IRI: http://purl.obolibrary.org/obo/MONDO_0002032

AnnotationAssertion
IRI: ColonClinicalCaseReport
IRI: General

AnnotationAssertion
IRI: ColonClinicalCaseReport
literal: Class representing all colon cancer cases.

AnnotationAssertion
IRI: ColonClinicalCaseReport
literal: Caso clinico di cancro al Colon @it

AnnotationAssertion
IRI: ColonClinicalCaseReport
literal: Colon Clinical Case Report

AnnotationAssertion
IRI: ColonClinicalCaseReport
literal: tilfælde rapport om tyktarmskræft @nl

AnnotationAssertion
IRI: ColonClinicalCaseReport
IRI: http://purl.obolibrary.org/obo/MONDO_0002032

AnnotationAssertion
IRI: DiseaseAnnotation
literal: A container class for elements that may or may not be present in diseases. One disease may present some elements that are not exaclty directly correlated to the presence/absence of the disease. or elements that are just there, and it is useful to note their presence/absence. This is the class of all elements that can be considered a sort of addendum, information extracted from the clinical case record but not directly related to the presence outcome. The inspiration for this class first came when we had to deal with the Annotations to the Case of the Celiac Disease. You can also think of this class as a superclass for other containers.

AnnotationAssertion
IRI: DiseaseAnnotation
literal: Annotazione di una malattia @it

AnnotationAssertion
IRI: DiseaseAnnotation
literal: Disease Annotation

AnnotationAssertion
IRI: DiseaseAnnotation
literal: sygdom annotation @nl

AnnotationAssertion
IRI: FloatCheckElement
literal: A set of checks that can be performed on a Immunohistochemical Test that present a float as output value.

AnnotationAssertion
IRI: FloatCheckElement
literal: Float Check Element

AnnotationAssertion
IRI: FloatCheckElement
literal: check float @it

AnnotationAssertion
IRI: FloatCheckElement
literal: float check @nl

AnnotationAssertion
IRI: FloatCheckElement
IRI: Test

AnnotationAssertion
IRI: General
literal: General is the area of entities that are common to all clinical cases. Organization, clinical case rteports, diseases, are elements that are common to all the records and therefore do not pertain notions such as location or intervention. For lack of a better term, we used general.

AnnotationAssertion
IRI: General
literal: generisk enhed @nl

AnnotationAssertion
IRI: General
literal: Entità Generica @it

AnnotationAssertion
IRI: General
literal: General Entity

AnnotationAssertion
IRI: InconclusiveOutcome
literal: Inconclusive Outcome. Not enough tissue or not enough evidence was present to decide for a negative or positive outcome.

AnnotationAssertion
IRI: InconclusiveOutcome
literal: Inconclusive Outcome

AnnotationAssertion
IRI: InconclusiveOutcome
literal: Risultato Inconclusivo @it

AnnotationAssertion
IRI: InconclusiveOutcome
literal: uomgængeligt resultat @nl

AnnotationAssertion
IRI: InconclusiveOutcome
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: InsufficientMaterial
literal: Inconclusive outcome where not enough material was present for the diagnosis.

AnnotationAssertion
IRI: InsufficientMaterial
literal: Insufficient Material

AnnotationAssertion
IRI: InsufficientMaterial
literal: materiale insufficiente @it

AnnotationAssertion
IRI: InsufficientMaterial
literal: utilstrækkeligt materiale @nl

AnnotationAssertion
IRI: InsufficientMaterial
literal: M010100

AnnotationAssertion
IRI: InsufficientMaterial
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: InsufficientMaterial
IRI: http://linkedlifedata.com/resource/umls/id/C0332630

AnnotationAssertion
IRI: InterventionHasLocation
literal: every intervention/procedure is performed in an anatomical location. We use the topology entities to encode the information about this location. We use this property supposing to reference one subclass of Topography.

AnnotationAssertion
IRI: InterventionHasLocation
literal: intervention has topography

AnnotationAssertion
IRI: InterventionHasLocation
literal: leasing af interventionen @nl

AnnotationAssertion
IRI: InterventionHasLocation
literal: topografia dell'intervento @it

AnnotationAssertion
IRI: NegativeResult
literal: The presence of a negative result, i.e. normal tissue

AnnotationAssertion
IRI: NegativeResult
literal: negativt resultat @nl

AnnotationAssertion
IRI: NegativeResult
literal: Negative Result

AnnotationAssertion
IRI: NegativeResult
literal: M00100

AnnotationAssertion
IRI: NegativeResult
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: NoMalignancy
literal: No Evidence of Malignancy

AnnotationAssertion
IRI: NoMalignancy
literal: Nessuna evidenza di Malignità @it

AnnotationAssertion
IRI: NoMalignancy
literal: No Malignancy

AnnotationAssertion
IRI: NoMalignancy
literal: ingen malignitet @nl

AnnotationAssertion
IRI: NoMalignancy
literal: M09450

AnnotationAssertion
IRI: PositiveOutcome
literal: Positive Outcome, i.e., something has been found in the patient. This is the higher class for the positive outcome.

AnnotationAssertion
IRI: PositiveOutcome
literal: Positive outcome

AnnotationAssertion
IRI: PositiveOutcome
literal: Risultato positivo @it

AnnotationAssertion
IRI: PositiveOutcome
literal: positivt resultat @nl

AnnotationAssertion
IRI: PositiveOutcome
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: Procedure
literal: Semantic class to describe the semantic area of the interventions. We defined our own class (and not used the ncit one) because we wanted to keep the two separated to not entangle too much queries and also because here we are using it with a slightly different semantic meaning.

AnnotationAssertion
IRI: Procedure
literal: Procedura @it

AnnotationAssertion
IRI: Procedure
literal: Procedure

AnnotationAssertion
IRI: Procedure
literal: Procedure @nl

AnnotationAssertion
IRI: Procedure
literal: Intervention

AnnotationAssertion
IRI: SemantcArea
literal: A general container for entities that represent semantical areas. Examples of semantical areas include "general" (common to all diseases), "Anatomic Site", "Procedure", "Diagnosis".

AnnotationAssertion
IRI: SemantcArea
literal: Area Semantica @it

AnnotationAssertion
IRI: SemantcArea
literal: Semantic Area

AnnotationAssertion
IRI: SemantcArea
literal: Semantisk område @nl

AnnotationAssertion
IRI: SevereColonDysplasia
literal: Severe Colon Dysplasia; Severe dysplasia of colon

AnnotationAssertion
IRI: SevereColonDysplasia
literal: Grave Displasia del Colon @it

AnnotationAssertion
IRI: SevereColonDysplasia
literal: Severe Colon Dysplasia

AnnotationAssertion
IRI: SevereColonDysplasia
literal: alvorlig kolon dysplasi @nl

AnnotationAssertion
IRI: SevereColonDysplasia
IRI: http://purl.obolibrary.org/obo/NCIT_C8364

AnnotationAssertion
IRI: SevereColonDysplasia
IRI: http://purl.obolibrary.org/obo/MONDO_0002032

AnnotationAssertion
IRI: SevereColonDysplasia
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: SevereColonDysplasia
IRI: http://linkedlifedata.com/resource/umls/id/C0586369

AnnotationAssertion
IRI: SpecimenUnsatisfactory
literal: Campione inadeguato per una diagnosi @it

AnnotationAssertion
IRI: SpecimenUnsatisfactory
literal: Specimen unsatisfactory for diagnosis

AnnotationAssertion
IRI: SpecimenUnsatisfactory
literal: prøve ikke tilfredsstillende til diagnose @nl

AnnotationAssertion
IRI: SpecimenUnsatisfactory
literal: M090000

AnnotationAssertion
IRI: SpecimenUnsatisfactory
IRI: http://purl.obolibrary.org/obo/NCIT_C15220

AnnotationAssertion
IRI: SpecimenUnsatisfactory
IRI: http://linkedlifedata.com/resource/umls/id/C0702119

AnnotationAssertion
IRI: Test
literal: Test is a semantic area encompassing all those entities representing one test. One example are the immunistochemical tests like the immunoprecipitation. These tests may have different outcome, like being true or false, or a non-negative integer.

AnnotationAssertion
IRI: Test
literal: Test

AnnotationAssertion
IRI: Test
literal: Test @it

AnnotationAssertion
IRI: Test
literal: prøve @nl

AnnotationAssertion
IRI: Test
literal: Test (Semantic Area)

AnnotationAssertion
IRI: annotatedRule
literal: This property is used to annotated classes with a comment representing the rule that we inferred during the process of definition of this ontology. This rule may be impkemented to extract entities from a clinical case record. NB: we do not guarantee that these rules are always valid, or that they are the only valid. It may be the case that they are inaccurate since we were only able to infer them from the cases that were provided to us. Treat these annotations only as a documentation of our process and for a first implementation of the entities extractor.

AnnotationAssertion
IRI: annotatedRule
literal: annotated rule

AnnotationAssertion
IRI: annotatedRule
literal: regel for annotering @nl

AnnotationAssertion
IRI: annotatedRule
literal: regola per l'annotazione @it

AnnotationAssertion
IRI: associatedKeywordInDiagnosis
literal: property to take notes (for reminding us/ help us define rule/ do some reasoning) about which keywords to look for in the Diagnosis field of a medical record

AnnotationAssertion
IRI: associatedKeywordInDiagnosis
literal: associated keyword in diagnosis

AnnotationAssertion
IRI: associatedKeywordInDiagnosis
literal: nøgleord, der er knyttet til diagnosen @nl

AnnotationAssertion
IRI: associatedKeywordInDiagnosis
literal: parole chiave associate nella diagnosi @it

AnnotationAssertion
IRI: associatedKeywordInMateriali
literal: Connects one class (a location or a intervention) to the keyword in the field 'Material' that, if found, indicates the presence of that class.

AnnotationAssertion
IRI: associatedKeywordInMateriali
literal: associated keyword in Materials

AnnotationAssertion
IRI: associatedKeywordInMateriali
literal: parole chiave associate nel campo Materiali @it

AnnotationAssertion
IRI: associatedKeywordInMateriali
literal: tilknyttede nøgleord i feltet Materialer @nl

AnnotationAssertion
IRI: checkOutcome
literal: Connects one annotation to its boolean value

AnnotationAssertion
IRI: checkOutcome
literal: outcome

AnnotationAssertion
IRI: checkOutcome
literal: presenta risultato @it

AnnotationAssertion
IRI: checkOutcome
literal: udfald @nl

AnnotationAssertion
IRI: definition
literal: Property representing the definition in the ontobee website. In later versions of the ontology we prefer rdfs:comment since it is more universally used.

AnnotationAssertion
IRI: definition
literal: Definition

AnnotationAssertion
IRI: definition
literal: Definition @nl

AnnotationAssertion
IRI: definition
literal: Definizione @it

AnnotationAssertion
IRI: hasAge
literal: Connects the Report to the age of the patient.

AnnotationAssertion
IRI: hasAge
literal: età @it

AnnotationAssertion
IRI: hasAge
literal: har alder @nl

AnnotationAssertion
IRI: hasAge
literal: has age

AnnotationAssertion
IRI: hasAgeOnset
literal: Links one record to its age group, or 'onset'.

AnnotationAssertion
IRI: hasAgeOnset
literal: ha gruppo d'età @it

AnnotationAssertion
IRI: hasAgeOnset
literal: har aldersgruppe @nl

AnnotationAssertion
IRI: hasAgeOnset
literal: has age onset

AnnotationAssertion
IRI: hasBlockNumber
literal: The block number identifies the part of the image connected to the diagnosis (for Radbound). For AOC this property is not necessary. We use it to contain the "internal id".

AnnotationAssertion
IRI: hasBlockNumber
literal: ha numero di blocco @it

AnnotationAssertion
IRI: hasBlockNumber
literal: has block number

AnnotationAssertion
IRI: hasBlockNumber
literal: heeft bloknummer @nl

AnnotationAssertion
IRI: hasClinicalCaseReport
literal: Coonects one patient to its clinical case report.

AnnotationAssertion
IRI: hasClinicalCaseReport
literal: ha Caso Clinico @it

AnnotationAssertion
IRI: hasClinicalCaseReport
literal: has Clinical Case Report

AnnotationAssertion
IRI: hasClinicalCaseReport
literal: heeft Clinical Case Report @nl

AnnotationAssertion
IRI: hasDiagnosisText
literal: Connects an instance of clinical case to its diagnosis, i.e. the text written by the medical doctor. @nl

AnnotationAssertion
IRI: hasDiagnosisText
literal: har diagnosefelt @nl

AnnotationAssertion
IRI: hasDiagnosisText
literal: has textual diagnosis

AnnotationAssertion
IRI: hasDiagnosisText
literal: presenta campo diagnosi @it

AnnotationAssertion
IRI: hasDysplasia
literal: This property connects an instance of outcome for a case of Colon cancer to a presence of Dysplasia (if it is present). Cardinality between 0 and 1.

AnnotationAssertion
IRI: hasDysplasia
literal: has dysplasia

AnnotationAssertion
IRI: hasDysplasia
literal: presenta displasia @it

AnnotationAssertion
IRI: hasDysplasia
literal: præsenterer dysplasi @nl

AnnotationAssertion
IRI: hasDysplasia
literal: 1

AnnotationAssertion
IRI: hasDysplasia
literal: 0

AnnotationAssertion
IRI: hasGender
literal: To connect a record with the gender of the corresponding person.

AnnotationAssertion
IRI: hasGender
literal: har køn @nl

AnnotationAssertion
IRI: hasGender
literal: has gender

AnnotationAssertion
IRI: hasGender
literal: presenta genere @it

AnnotationAssertion
IRI: hasImage
literal: Connects a clinical case report to the name of its corresponding image.

AnnotationAssertion
IRI: hasImage
literal: has image

AnnotationAssertion
IRI: hasImage
literal: heeft een afbeelding @nl

AnnotationAssertion
IRI: hasImage
literal: presenta immagine @it

AnnotationAssertion
IRI: hasIntervention
literal: A report is associated to an intervention (or procedure) that was performed to the patient to obtain the tissue used to study the presence (or absence) of the disease.

AnnotationAssertion
IRI: hasIntervention
literal: Has Intervention

AnnotationAssertion
IRI: hasIntervention
literal: intervento associato @it

AnnotationAssertion
IRI: hasIntervention
literal: tilknyttet intervention @nl

AnnotationAssertion
IRI: hasLocation
literal: A clinical case record is focused on an anatomical location. This property connects an instance of clinical case report (of whatever type) to an anatomical location, a member of the class topology.

AnnotationAssertion
IRI: hasLocation
literal: ha posizione anatomica @it

AnnotationAssertion
IRI: hasLocation
literal: har placering @nl

AnnotationAssertion
IRI: hasLocation
literal: has location

AnnotationAssertion
IRI: hasOntobeeAnnotation
literal: A property to connect one entity to the annotations found for that entitiy in the corresponding page in Ontobee (http://www.ontobee.org/).

AnnotationAssertion
IRI: hasOntobeeAnnotation
literal: ha annotazione in ontobee @it

AnnotationAssertion
IRI: hasOntobeeAnnotation
literal: har rekord fra ontobee @nl

AnnotationAssertion
IRI: hasOntobeeAnnotation
literal: has ontobee annotation

AnnotationAssertion
IRI: hasOutcome
literal: Every report has an outcome, whatever it may be (positive, negative, inconclusive etc.)

AnnotationAssertion
IRI: hasOutcome
literal: har resultatet @nl

AnnotationAssertion
IRI: hasOutcome
literal: has outcome

AnnotationAssertion
IRI: hasOutcome
literal: presenta risultato @it

AnnotationAssertion
IRI: hasSNOMEDCode
literal: Use this property to annotate one entity with its corresponding SNOMED code.

AnnotationAssertion
IRI: hasSNOMEDCode
literal: ha codice SNOMED @it

AnnotationAssertion
IRI: hasSNOMEDCode
literal: har SNOMED-kode @nl

AnnotationAssertion
IRI: hasSNOMEDCode
literal: has SNOMED code

AnnotationAssertion
IRI: hasSemanticArea
literal: Connects one ontology class or Individual to the semantic area to which it belongs. For example, a Polyp is a diagnosis, therefore the Polyp belongs to the semantic area of Diagnosis.

AnnotationAssertion
IRI: hasSemanticArea
literal: har semantisk område @nl

AnnotationAssertion
IRI: hasSemanticArea
literal: has Semantic Area

AnnotationAssertion
IRI: hasSemanticArea
literal: presenta area semantica @it

AnnotationAssertion
IRI: hasSynonymLabel
literal: Use this property when you want to add a synonim label. You should not use this property when you want to add synonims that are going to be used in some algorithm or methodlogy. You should use hasSynonim instead.

AnnotationAssertion
IRI: hasSynonymLabel
literal: ha label sinonimo @it

AnnotationAssertion
IRI: hasSynonymLabel
literal: har synonym etiket @nl

AnnotationAssertion
IRI: hasSynonymLabel
literal: has synonym label

AnnotationAssertion
IRI: hasTest
literal: connects an instance of intervention to some trait found in the patient.

AnnotationAssertion
IRI: hasTest
literal: har test @nl

AnnotationAssertion
IRI: hasTest
literal: has test

AnnotationAssertion
IRI: hasTest
literal: presenta test @it

AnnotationAssertion
IRI: hasUMLS
literal: This property connects an element to its UMLS code

AnnotationAssertion
IRI: hasUMLS
literal: ha codice UMLS @it

AnnotationAssertion
IRI: hasUMLS
literal: har UMLS-kode @nl

AnnotationAssertion
IRI: hasUMLS
literal: has UMLS code

AnnotationAssertion
IRI: hasValue
literal: Connects a test annotation to its float value

AnnotationAssertion
IRI: hasValue
literal: har værdi @nl

AnnotationAssertion
IRI: hasValue
literal: has value

AnnotationAssertion
IRI: hasValue
literal: presenta valore @it

AnnotationAssertion
IRI: hasValue
literal: 1

AnnotationAssertion
IRI: isAboutDisease
literal: This property is used to connect an instance of a clinical case to an instance of Disease. We want to note here, since we found ourselves thinking about this, that one disease, e.g. colon cancer, is itself a subclass of Disease, but also an instance of Disease (there may be many different types of colon cancer, but also colon cancer is a disease by itself). Thus, this property has as a range the disease and you should expect, every time you have a report, to have this property pointing to one of the four instances of disease. In the future this decision may change.

AnnotationAssertion
IRI: isAboutDisease
literal: connessa alla malattia @it

AnnotationAssertion
IRI: isAboutDisease
literal: handler om sygdom @nl

AnnotationAssertion
IRI: isAboutDisease
literal: is about disease

AnnotationAssertion
IRI: isAboutDisease
literal: 1

AnnotationAssertion
IRI: isSpecificationOf
literal: We may have certain hyerarchies that are not exactly in a relation of type subClassOf or partOf. These are usually determined by specification of more general concepts. We use this property to express such hyerarchies. One example (the only one for now in ExaMode) is the one of the Dysplasia.

AnnotationAssertion
IRI: isSpecificationOf
literal: er specifik for @nl

AnnotationAssertion
IRI: isSpecificationOf
literal: is specification of

AnnotationAssertion
IRI: isSpecificationOf
literal: è specifica di @it

AnnotationAssertion
IRI: presenceOf
literal: This property is used to connect an outcome instance to a generic annotation which signals the presence of more information correlating the clinical case and which may not be directly pertinent to the disease but however still linked to it.

AnnotationAssertion
IRI: presenceOf
literal: individuata presenza di @it

AnnotationAssertion
IRI: presenceOf
literal: presence of

AnnotationAssertion
IRI: presenceOf
literal: tilstedeværelse af @nl

AnnotationAssertion
IRI: taxonNotes
literal: An additional field that may be present in medical reports to describe entities taken from Ontobee's ontologies. You can consider it as an alternative definition.

AnnotationAssertion
IRI: taxonNotes
literal: Note tassonomiche @it

AnnotationAssertion
IRI: taxonNotes
literal: taksonomiske noter @nl

AnnotationAssertion
IRI: taxonNotes
literal: taxon notes

AnnotationAssertion
IRI: testUsed
literal: the test being used in this report

AnnotationAssertion
IRI: testUsed
literal: test brugt @nl

AnnotationAssertion
IRI: testUsed
literal: test used

AnnotationAssertion
IRI: testUsed
literal: test utilizzato @it

AnnotationAssertion
IRI: https://www.ebi.ac.uk/ols/ontologies/doid/Disease
literal: General class representing one disease.

AnnotationAssertion
IRI: https://www.ebi.ac.uk/ols/ontologies/doid/Disease
literal: Disease

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:nonNegativeInteger

AnnotationPropertyRange
abbreviated IRI: xsd:nonNegativeInteger

AnnotationPropertyRange
abbreviated IRI: xsd:nonNegativeInteger

AnnotationPropertyRange
abbreviated IRI: owl:Thing

AnnotationPropertyRange
abbreviated IRI: owl:Thing

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
IRI: ColonAnnotation

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyRange
abbreviated IRI: owl:Thing

AnnotationPropertyRange
abbreviated IRI: xsd:string

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
annotation:
  literal: Only a Positive Outcome has Dysplasia.
IRI: PositiveOutcome

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing

AnnotationPropertyDomain
abbreviated IRI: owl:Thing