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Published December 22, 2015 | Version v0
Dataset Open

Raman spectra of the Adenoma-Carcinoma-Sequence in a mice model

  • 1. Leibniz Institute of Photonic Technology
  • 2. Institute of Pathology, Jena University Hospital
  • 3. Clinic for Internal Medicine IV, Jena University Hospital
  • 4. Institute for Tumor Biology and Experimental Therapy, Georg-Speyer-Haus
  • 5. Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller University Jena

Description

In the following, a short desciption for each csv files:

  1. Meta data: includes information about mice ID, scans collected from each mouse, location of extracted scans, activity of P53 gene, mouce gender, tissue type.
  2. MSpectra: contains mean spectra of tissue types with respect to each extracted scan.
  3. TissueLabels: describes different divisions of tissue types;e.g. normal vs abnormal, normal vs HB vs Karzinom, normal vs HB vs adenoma vs carcinoma
  4. Wavenumbers: includes Raman spectra wavenumbers. 

Files

MetaData.csv

Files (6.9 MB)

Name Size Download all
md5:9cf43fcaaa3d5bbce7f75168699eac49
15.3 kB Preview Download
md5:308c5ef8b43eb834b7cdf7d53e9aa1d4
6.9 MB Preview Download
md5:1ed3a179b7f4e0c97ddb3ec8a512846f
11.4 kB Preview Download
md5:5adc84ef536d3df642add5bd7d560a26
3.9 kB Preview Download

Additional details

References

  • N. Vogler; T. Bocklitz; F. S. Salah; C. Schmidt; R. Bräuer; T. Cui; M. Mireskandari; F. Greten; M. Schmitt; A. Stallmach; I. Petersen & J. Popp Systematic evaluation of colorectal tissue diagnostics based on the statistical analysis of Raman spectra J. Biophoton., 2015, 9, 533-541
  • T. Bocklitz; F. S. Salah; N. Vogler; S. Heuke; O. Chernavskaia; C. Schmidt; M. Waldner; F. R. Greten; R. Bräuer; M. Schmitt; A. Stallmach; I. Petersen & Jü. Popp Pseudo-HE images derived from CARS/TPEF/SHG multimodal imaging in combination with Raman-spectroscopy as a pathological screening tool BMC Cancer, 2016, 16, 1-11