Dataset Open Access

Tissue-mimics example datasets for Icy protocols

Corinne Lorenzo; Jordi Andilla

Dublin Core Export

<?xml version='1.0' encoding='utf-8'?>
<oai_dc:dc xmlns:dc="" xmlns:oai_dc="" xmlns:xsi="" xsi:schemaLocation="">
  <dc:creator>Corinne Lorenzo</dc:creator>
  <dc:creator>Jordi Andilla</dc:creator>
  <dc:description>This upload contains three image datasets to test the Icy protocols P1 to P3 and plugin metroloSPIM described in Andilla, J., Jorand, R., Olarte, O. et al. Imaging tissue-mimic with light sheet microscopy: A comparative guideline. Sci Rep 7, 44939 (2017).  

MCTS_H2B-FP.tif: tissue-mimics example dataset to test Icy protocol P1 – Detect tissue mimics and crop 3D sub-volume

MCTS_H2B-FP_crop.tif: crop of MCTS_H2B-FP.tif (tissue-mimics example dataset) to test Icy protocol P2 – SNR and contrast measurements 

MCTS_Beads.tif: fluorescent beads example dataset to test Icy protocol P3 – Characterize the PSF from beads in 3D </dc:description>
  <dc:subject>light-sheet microscopy, SPIM, bioimage analysis, Icy software</dc:subject>
  <dc:title>Tissue-mimics example datasets for Icy protocols</dc:title>
All versions This version
Views 1212
Downloads 66
Data volume 1.8 GB1.8 GB
Unique views 1111
Unique downloads 55


Cite as