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Tissue-mimics example datasets for Icy protocols

Corinne Lorenzo; Jordi Andilla


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.3903398", 
  "author": [
    {
      "family": "Corinne Lorenzo"
    }, 
    {
      "family": "Jordi Andilla"
    }
  ], 
  "issued": {
    "date-parts": [
      [
        2021, 
        1, 
        27
      ]
    ]
  }, 
  "abstract": "<p>This upload contains three image datasets to test the Icy protocols P1 to P3 and plugin <a href=\"http://icy.bioimageanalysis.org/plugin/metrolospim/\">metroloSPIM</a> described in Andilla, J., Jorand, R., Olarte, O. <em>et al.</em> Imaging tissue-mimic with light sheet microscopy: A comparative guideline. <a href=\"https://www.nature.com/articles/srep44939\"><em>Sci Rep</em></a> <strong>7, </strong>44939 (2017). https://doi.org/10.1038/srep44939 &nbsp;</p>\n\n<p><strong>MCTS_H2B-FP.tif</strong>: tissue-mimics example dataset to test Icy protocol&nbsp;<a href=\"http://icy.bioimageanalysis.org/protocol/p1-detect-tissue-mimics-and-crop-3d-sub-volume/\">P1 &ndash; Detect tissue mimics and crop 3D sub-volume</a></p>\n\n<p><strong>MCTS_H2B-FP_crop.tif</strong>: crop of&nbsp;MCTS_H2B-FP.tif (tissue-mimics example dataset) to test Icy protocol&nbsp;<a href=\"http://icy.bioimageanalysis.org/protocol/p2-snr-and-contrast-measurements/\">P2 &ndash; SNR and contrast measurements</a>&nbsp;</p>\n\n<p><strong>MCTS_Beads.tif</strong>: fluorescent beads example dataset to test Icy protocol&nbsp;<a href=\"http://icy.bioimageanalysis.org/protocol/p3-characterize-the-psf-from-beads-in-3d/\">P3 &ndash; Characterize the PSF from beads in 3D</a>&nbsp;</p>", 
  "title": "Tissue-mimics example datasets for Icy protocols", 
  "type": "dataset", 
  "id": "3903398"
}
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