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napari/napari: 0.3.5

Nicholas Sofroniew; Talley Lambert; Kira Evans; Juan Nunez-Iglesias; Kevin Yamauchi; Ahmet Can Solak; Genevieve Buckley; Grzegorz Bokota; Tony Tung; ziyangczi; Jeremy Freeman; Peter Boone; Philip Winston; Loic Royer; Hagai Har-Gil; Shannon Axelrod; Ariel Rokem; Bryant; Hector; Mars Huang; Pranathi Vemuri; Reece Dunham; jakirkham; Alexandre de Siqueira; Bhavya Chopra; Chris Wood; Christoph Gohlke; Davis Bennett; DragaDoncila; Eric Perlman


DataCite XML Export

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  <identifier identifierType="DOI">10.5281/zenodo.3900158</identifier>
  <creators>
    <creator>
      <creatorName>Nicholas Sofroniew</creatorName>
      <affiliation>CZI</affiliation>
    </creator>
    <creator>
      <creatorName>Talley Lambert</creatorName>
      <affiliation>Harvard University</affiliation>
    </creator>
    <creator>
      <creatorName>Kira Evans</creatorName>
      <affiliation>@chanzuckerberg</affiliation>
    </creator>
    <creator>
      <creatorName>Juan Nunez-Iglesias</creatorName>
      <affiliation>Monash Micro Imaging, Monash University</affiliation>
    </creator>
    <creator>
      <creatorName>Kevin Yamauchi</creatorName>
    </creator>
    <creator>
      <creatorName>Ahmet Can Solak</creatorName>
      <affiliation>Chan Zuckerberg Biohub</affiliation>
    </creator>
    <creator>
      <creatorName>Genevieve Buckley</creatorName>
      <affiliation>Monash University</affiliation>
    </creator>
    <creator>
      <creatorName>Grzegorz Bokota</creatorName>
      <affiliation>University of Warszaw, CeNT</affiliation>
    </creator>
    <creator>
      <creatorName>Tony Tung</creatorName>
      <affiliation>@chanzuckerberg</affiliation>
    </creator>
    <creator>
      <creatorName>ziyangczi</creatorName>
      <affiliation>@chanzuckerberg</affiliation>
    </creator>
    <creator>
      <creatorName>Jeremy Freeman</creatorName>
      <affiliation>@carbonplan</affiliation>
    </creator>
    <creator>
      <creatorName>Peter Boone</creatorName>
      <affiliation>Cell Microsystems</affiliation>
    </creator>
    <creator>
      <creatorName>Philip Winston</creatorName>
    </creator>
    <creator>
      <creatorName>Loic Royer</creatorName>
      <affiliation>Chan Zuckerberg Biohub</affiliation>
    </creator>
    <creator>
      <creatorName>Hagai Har-Gil</creatorName>
    </creator>
    <creator>
      <creatorName>Shannon Axelrod</creatorName>
    </creator>
    <creator>
      <creatorName>Ariel Rokem</creatorName>
      <affiliation>The University of Washington eScience Institute</affiliation>
    </creator>
    <creator>
      <creatorName>Bryant</creatorName>
      <affiliation>CZ Biohub</affiliation>
    </creator>
    <creator>
      <creatorName>Hector</creatorName>
      <affiliation>UCLA Bioengineering</affiliation>
    </creator>
    <creator>
      <creatorName>Mars Huang</creatorName>
    </creator>
    <creator>
      <creatorName>Pranathi Vemuri</creatorName>
      <affiliation>CZ BioHub</affiliation>
    </creator>
    <creator>
      <creatorName>Reece Dunham</creatorName>
    </creator>
    <creator>
      <creatorName>jakirkham</creatorName>
    </creator>
    <creator>
      <creatorName>Alexandre de Siqueira</creatorName>
      <affiliation>@BIDS</affiliation>
    </creator>
    <creator>
      <creatorName>Bhavya Chopra</creatorName>
      <affiliation>@precog-iiitd</affiliation>
    </creator>
    <creator>
      <creatorName>Chris Wood</creatorName>
    </creator>
    <creator>
      <creatorName>Christoph Gohlke</creatorName>
      <affiliation>University of California, Irvine</affiliation>
    </creator>
    <creator>
      <creatorName>Davis Bennett</creatorName>
    </creator>
    <creator>
      <creatorName>DragaDoncila</creatorName>
    </creator>
    <creator>
      <creatorName>Eric Perlman</creatorName>
    </creator>
  </creators>
  <titles>
    <title>napari/napari: 0.3.5</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2020</publicationYear>
  <dates>
    <date dateType="Issued">2020-06-18</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/3900158</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/napari/napari/tree/v0.3.5</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.3555620</relatedIdentifier>
  </relatedIdentifiers>
  <version>v0.3.5</version>
  <rightsList>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">napari 0.3.5
&lt;p&gt;We're happy to announce the release of napari 0.3.5!
napari is a fast, interactive, multi-dimensional image viewer for Python.
It's designed for browsing, annotating, and analyzing large multi-dimensional
images. It's built on top of Qt (for the GUI), vispy (for performant GPU-based
rendering), and the scientific Python stack (numpy, scipy).&lt;/p&gt;
&lt;p&gt;For more information, examples, and documentation, please visit our website:
&lt;a href="https://github.com/napari/napari"&gt;https://github.com/napari/napari&lt;/a&gt;&lt;/p&gt;
Highlights
&lt;p&gt;This release contains a number of bug fixes on various platforms. For those
interested in napari performance, we have added a new performance monitoring
mode, that can be activated by the &lt;code&gt;NAPARI_PERFMON&lt;/code&gt; environment variable, see
(#1262) for details. We have also added a page in the explanations section of
our docs on napari's &lt;a href="https://napari.org/docs/explanations/rendering.html"&gt;rendering&lt;/a&gt;
including plans for the future.&lt;/p&gt;
New Features
&lt;ul&gt;
&lt;li&gt;Allow using of custom color dictionary in labels layer (#1339 and #1362)&lt;/li&gt;
&lt;li&gt;Allow Shapes face and edge colors to be mapped to properties (#1342)&lt;/li&gt;
&lt;li&gt;Add performance monitoring widget (#1262)&lt;/li&gt;
&lt;/ul&gt;
Improvements
&lt;ul&gt;
&lt;li&gt;Factor out ImageSlice and ImageView from Image (#1343)&lt;/li&gt;
&lt;/ul&gt;
Bug Fixes
&lt;ul&gt;
&lt;li&gt;Fix warning for python 3.8 (#1335)&lt;/li&gt;
&lt;li&gt;Fix range slider position (#1344)&lt;/li&gt;
&lt;li&gt;Fix Linux and Windows key hold detection (#1350)&lt;/li&gt;
&lt;li&gt;Fix crash when selecting all points (#1358)&lt;/li&gt;
&lt;li&gt;Fix deleting layers changing dims (#1359)&lt;/li&gt;
&lt;li&gt;Revert "remove scipy.stats import (#1250)" (#1371)&lt;/li&gt;
&lt;/ul&gt;
Build Tools and Support
&lt;ul&gt;
&lt;li&gt;Remove broken link from BENCHMARKS.md (#1236)&lt;/li&gt;
&lt;li&gt;New documentation on rendering (#1328)&lt;/li&gt;
&lt;li&gt;Remove incorrect dashes in cirrus push_docs task (#1330)&lt;/li&gt;
&lt;li&gt;Use correct pyqt version in tests (#1331)&lt;/li&gt;
&lt;li&gt;Fix docs version, reformat, and add explanations (#1368)&lt;/li&gt;
&lt;/ul&gt;
8 authors added to this release (alphabetical)
&lt;ul&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=GenevieveBuckley"&gt;Genevieve Buckley&lt;/a&gt; - @GenevieveBuckley&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=Czaki"&gt;Grzegorz Bokota&lt;/a&gt; - @Czaki&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=jni"&gt;Juan Nunez-Iglesias&lt;/a&gt; - @jni&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=kevinyamauchi"&gt;Kevin Yamauchi&lt;/a&gt; - @kevinyamauchi&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=sofroniewn"&gt;Nicholas Sofroniew&lt;/a&gt; - @sofroniewn&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=pwinston"&gt;Philip Winston&lt;/a&gt; - @pwinston&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=tlambert03"&gt;Talley Lambert&lt;/a&gt; - @tlambert03&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=ziyangczi"&gt;Ziyang Liu&lt;/a&gt; - @ziyangczi&lt;/li&gt;
&lt;/ul&gt;
8 reviewers added to this release (alphabetical)
&lt;ul&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=d-v-b"&gt;Davis Bennett&lt;/a&gt; - @d-v-b&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=jni"&gt;Juan Nunez-Iglesias&lt;/a&gt; - @jni&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=kevinyamauchi"&gt;Kevin Yamauchi&lt;/a&gt; - @kevinyamauchi&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=kne42"&gt;Kira Evans&lt;/a&gt; - @kne42&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=sofroniewn"&gt;Nicholas Sofroniew&lt;/a&gt; - @sofroniewn&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=pwinston"&gt;Philip Winston&lt;/a&gt; - @pwinston&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=tlambert03"&gt;Talley Lambert&lt;/a&gt; - @tlambert03&lt;/li&gt;
&lt;li&gt;&lt;a href="https://github.com/napari/napari/commits?author=ziyangczi"&gt;Ziyang Liu&lt;/a&gt; - @ziyangczi&lt;/li&gt;
&lt;/ul&gt;</description>
  </descriptions>
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